Idiomarina sp. OXR-189: UM402_06155
Help
Entry
UM402_06155 CDS
T11485
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
Organism
idx Idiomarina sp. OXR-189
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
YknX_C
HH_EMRA
BSH_CzcB
BSH_CusB
Beta-barrel_RND_2
HH_AAEA_pHBA
HH_CyaD
HH_YBHG
DUF5667
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
WPZ02487
LinkDB
All DBs
Position
complement(1247578..1248729)
Genome browser
AA seq
383 aa
AA seq
DB search
MKKRFQIAPLFAAGILATTVLTGCGDAPQQGQQQQAPQVDVITVKPETLELSTELPGRTA
AFRVAEVRPQVSGVLLERTFEEGTFVEKGQQLYQINPATYEAELASAEAEVQRAKAVLRS
SELRYNRFKELIEENAVSQDEFDSAEATYFQNKAAVAVAEAQLKNARINLEYTKVNAPIN
GIIGRSNFTEGALVTASQQEPLVTINQLDPIYVDISQSSKQFMQLQADIQSGRIEANESG
NAPVRLKLNGLDFDQQGELLFSEVSVEEDTGAILLRAVFPNPDKTLYPGMFVRAAVSEGT
INTALLLPQKAVTRDPRGRPYVMVVNSENKVEQRMITTERAIGSDWLVSDGVQEGDKVIT
SGLQKVRPGATVQISNSASNEQQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcgctttcaaattgcgccgttattcgcagcgggaattttagcaaccacagtc
ttaaccggctgtggtgacgcaccgcagcaaggtcagcaacaacaagctccgcaggtcgat
gttataacggtaaaacctgaaacactcgagctaagcaccgaactccccggccgtactgca
gcatttcgcgttgctgaggttcgcccgcaagtcagtggtgtacttttagaacgaacgttc
gaagaaggtactttcgtcgagaaaggtcaacagttgtatcaaattaacccggcaacttac
gaagcagaattagccagtgcagaggctgaagtacagcgcgcaaaagccgttttacgcagc
tcagaacttcgctataaccgcttcaaggagctcattgaagaaaacgcggtcagtcaggac
gaattcgacagtgccgaagcgacttattttcaaaataaagcagcggtcgcagtggcggaa
gctcaacttaaaaacgcacgaatcaaccttgagtacacgaaagttaatgcgcctatcaat
ggtattattggtcgctccaactttaccgagggcgccttggttacggcttctcagcaggaa
cctttagtgactatcaaccagcttgatcctatttatgttgatatcagccaatccagcaaa
caatttatgcagctgcaggccgatattcagtcaggtcgtatcgaagcgaatgagtcaggc
aatgcgccggttcgtttaaaactgaacggtttagactttgaccagcaaggcgaattgctg
ttttcagaggtaagcgttgaagaagataccggcgctattttgttaagagccgttttccct
aatccggataaaactctgtatccaggcatgtttgttagagccgctgtcagtgaaggcact
atcaacactgccctgttactgccgcaaaaagcagtgactcgtgatccgcgaggtcgccct
tatgtcatggtcgtcaacagtgaaaacaaagttgaacaacgcatgattactaccgagcga
gccattggcagtgactggttagtcagtgacggcgttcaagaaggtgacaaagttatcacc
tcaggccttcaaaaagttcgtccgggcgcgacggtccaaatttcgaactctgcctctaat
gaacagcagtaa
DBGET
integrated database retrieval system
