Ischnura elegans (blue-tailed damselfly): 124154025
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Entry
124154025 CDS
T09104
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03015
mRNA surveillance pathway
iel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124154025
09123 Folding, sorting and degradation
03018 RNA degradation
124154025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124154025
03041 Spliceosome [BR:
iel03041
]
124154025
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124154025
mRNA cycle factors
Stress granule specific factors
124154025
Spliceosome [BR:
iel03041
]
Complex C
Other components
Complex C specific factors
124154025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RBD_RDR6
RRM_occluded
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
124154025
NCBI-ProteinID:
XP_046383463
LinkDB
All DBs
Position
2:79071857..79087386
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AA seq
617 aa
AA seq
DB search
MASLYVGDLHPEVTEALLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL
DTMNFDLIKDRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCK
VATDETGGSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAK
RFTNVYIKNFADDLDDERLREMFEKYGRITSHKVMTADDGKSKGFGFVAFEEPEAAEKAV
DEMNGKDLNGKLLYVGRAQKKAERQQELKRRFEQLKIERLNRYQGVNLYVKNLDDTIDDE
RLRKEFSPFGTITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA
QRKEDRKAHLASQYMQRMANMRMQQMGQQIFQPNSGYFVPTLPQPQRFYNPAQIAQIRAT
PRWPAQPQVRPSAQVASGFPGVQGPYRSAPRAPTAQPGSVRGALSARPITGQQAGVGAAN
VPTPRPMGAPTVSAQGRPTSIKYTPNMRNPPQPMPVAQPPPVQQAVNIQGQEPLTATMLA
AASHHDQKQMLGERLFPLIQGMYQDLAGKITGMLLEIDNSELLHMLEHHESLKAKVEEAV
AVLQAHQAKQASLVKKD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttatatgttggtgatttgcatccggaagtaactgaggccttattgtttgag
aaattttcgacagctggcccagtactttcaataagagtatgtagggacatgataacacgt
aggtcgctgggttacgcctacgtcaattttcagcaacctgcagatgcggaaagagccctt
gacacaatgaattttgacttaataaaagatcggcctataagaatcatgtggtcgcagaga
gatccgtctcttcgaaagtctggtgtgggaaatgtattcataaaaaatttagataaaagt
attgacaacaaagccatgtacgacacattctccgcctttggtaacatattaagttgtaag
gttgctactgatgaaactggaggttccaaaggttatgggtttgtccacttcgaaacggag
gaagcagcaaacaagtctattgacaaagtgaacgggatgttgttgaacggcaagaaggtt
tatgttggtaaattcatcccacgcaaggagagagagaaggagctgggcgagaaggctaag
cgctttaccaacgtgtatatcaagaacttcgctgatgatttggatgatgaaaggctgagg
gagatgtttgagaaatatggaagaattacaagtcacaaggttatgacagcagatgatgga
aaatctaaaggttttggctttgttgcttttgaagaaccagaagcagctgaaaaggcagtg
gatgaaatgaatggaaaagatttaaatggaaagttgctgtatgttggccgtgctcaaaag
aaggctgagcgccaacaggagctgaagaggagatttgagcagttgaagatagagcgcttg
aaccgttatcaaggtgtgaatctgtatgtaaagaatctggatgacacaattgatgatgaa
cgtctgagaaaagaattctctccatttggcaccataactagtgcaaaggttatgctggaa
gagggccgaagcaagggatttggttttgtttgcttttcctcaccagaggaagctacaaag
gctgttacagagatgaatggccgcattgtaggttctaaacctttgtatgtggccttggct
cagcgtaaggaagatcgcaaagctcatttggcctcgcagtatatgcagagaatggctaat
atgcggatgcagcagatgggtcagcaaatattccagccgaacagtggatacttcgtgcca
actctgccgcagccacaacgtttctacaaccctgctcagattgctcaaatcagagcaact
cctcgctggcctgctcagccacaagttcgtccatctgctcaggttgcttcaggtttccca
ggagtccaaggaccatatcgatctgcccctcgtgctccaacagctcagccaggctctgtg
cgtggtgccctgtcagccagaccaatcaccggacagcaggcaggagttggtgctgcaaat
gttcccactcccagaccaatgggtgcaccaacagtctctgcgcagggtcgcccgacgagc
ataaagtatactccaaatatgcgaaatcctcctcagccaatgccagtcgcacagcctcca
cctgtgcaacaggcggttaacatacaagggcaggaacctctgacagccacaatgcttgct
gccgcttctcatcatgatcaaaaacaaatgctaggagagcgtttgttccctcttattcag
ggtatgtaccaggatctagcgggcaaaattactggaatgttacttgagatagacaattca
gagcttctgcatatgttggagcatcatgagtccctgaaagctaaggtcgaggaagctgtc
gcagtactccaggcccatcaagccaagcaggcatcactggtgaagaaagattaa
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