Ischnura elegans (blue-tailed damselfly): 124154464
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Entry
124154464 CDS
T09104
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124154464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iel03021
]
124154464
03019 Messenger RNA biogenesis [BR:
iel03019
]
124154464
Transcription machinery [BR:
iel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124154464
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124154464
U7-dependent histone pre-mRNA processing factors
124154464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Adaptin_N
INTS7_N
Motif
Other DBs
NCBI-GeneID:
124154464
NCBI-ProteinID:
XP_046384169
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All DBs
Position
2:complement(116183371..116225942)
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AA seq
1134 aa
AA seq
DB search
MARQDLESRRSTAAQFFMEEEMEDSVSSYKRIVDLLNQAAVANDSSKTDNLRRVQEIIVF
KEPNLLDNFLDEMLGFQSDRNADVRKFVVSFIEEACKKDPDVLPKVVRNLQIFLQDPSAQ
VQKRVIQAATHLYRSALSWLACARTVTEDMESSWTILCQIKAQIAKMVDSDNDGIRTLSV
KFLESVVLLQTYPEEDSLRRENDFSLEDIPLTLKIARRRKLEEEANTILDLLIKFHGSPH
ISSINLMTCMGTLTLIAKMRPQFMGKVVAALEMLHTNLPPTLSKSQVSSVRKHLKLQLFN
LLKHPASMDYQTNITSLLTDLGATYQEIAKSYPKAEEVRKRRKRNERAAIGQDAAAVAAK
KPRLEAPPRGAGVEEEDEDMDVEEEVSQKPKVEAIDVTERFVGERLTPDLASQLVVMAMS
KLPETIPPHFSSTYTPISAAGTPGQIKHLARLIASQLTAAGLGPGIKQSKNEVVKKLAVV
EDEDEEGEEEVVGVEREEKQVAPVPPAVVIKKPPQQRIKTLKLSEITKALEPEERERSVA
LAVGRILRAERSCATLSGVSPVRNKILTVIAAQFDENVGDAVRDFILEDLKNRTDLAFAW
LYEEYSFMQGFSRMPSFLRTQINPPEWAYNRLLCGMIQSLLEKQDAKDRDVLISRLYLEA
PLITEEATELLRQLCGDCNRASVGLGLLQELVVRRPPRHLVYLNLLLVYTAHEHGDIRTK
AIEGVVGLYERAELRSIIEEYAIFYLGFLRLPQPPVVLFGEDRGRPNIETQWSEDIVKVC
LYLYLALLPINENLIHELARVYVQTVADVKRVILRLLEAPVRGMGMDSPQLLTLVEECPK
GAETLVTRVIHILTDKTSPSAELVARVRDLYHTRVSDVRFLIPVLNGLTKKEVMAALPRL
IRLNPVVVKEVFNRLLGTHSEGATSPLTPAELLVALHNIDPSKADMKTIIKATSQCFAEK
QVYTQEVLAVVMQQLMEQSPLPTLLMRTVIQSLSLYPRLIGFVMNILQRLILKQVWKQKK
VWEGFIKCCQRTKPQSFQVLLQLPPAQLSDVFDNSPDLRQPLQAHVMALTENQRAHIPQA
IMDVLMGASRLDLSSLDADTEPVSPAELTIDMREEENEDSSGPNAEPAPPGDED
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacaggatctcgaatctcggcggagcaccgcagcccagttctttatggaagaa
gaaatggaagacagtgtttcatcttataaaagaatcgttgatttgctaaaccaagcagca
gttgcgaatgacagcagtaaaactgataatctgcgacgagtgcaagaaataattgtgttc
aaggagccgaatctgctggacaattttcttgatgaaatgcttggatttcagagtgatcgc
aatgctgatgtccgcaaatttgttgtttcttttattgaagaggcctgcaagaaggatcca
gatgttctacctaaagttgtaagaaaccttcagatattccttcaggacccttcagcccag
gtccaaaaaagggtaattcaagctgctacgcatctttatcgaagtgcattgtcttggctg
gcttgtgcacgaacagttaccgaggacatggaaagctcttggactattctttgtcagata
aaagcgcagatagcgaagatggttgatagtgacaatgatgggataaggactttgtctgtg
aagtttttggaatcagttgttcttctccaaacgtatccggaagaggatagcttgcggcgg
gagaatgacttctctcttgaggacattccgctcaccctgaagattgcacgccggaggaag
ttggaagaggaagccaataccatattggacttgctgataaaattccatggatcaccacat
attagcagcatcaacctaatgacatgcatgggaacacttactttaattgcaaaaatgagg
ccacagtttatgggaaaggtggtggctgctttggaaatgcttcatacaaatcttcctcca
accctttcaaaatcgcaagtaagttcagtgaggaagcatttaaagctgcagctgtttaac
ctgctgaaacatcctgcttcaatggattatcaaacgaacataacaagtctcttgacagac
ctgggagctacatatcaagagatagccaagtcatatccgaaagcagaagaggtgcggaag
aggcgcaagaggaatgagcgagctgccattggacaggatgcagcagccgtggctgccaag
aagccacgcttggaggcgccgccccgaggcgctggcgtggaggaggaggatgaagatatg
gatgtggaggaggaagtgagccagaagccaaaggtggaggcaatcgatgtgacagagcgc
tttgtgggcgagcggctgacccctgacctggcatcacaactggtcgtcatggccatgagt
aaactccccgagaccattccacctcattttagttcaacgtacacccccatttctgcagca
ggaacacctgggcaaatcaagcaccttgctcgcctcatagctagccagctgacggctgct
gggctgggacctggaatcaagcagtcaaagaatgaggtcgtaaagaagttggctgtggtg
gaggacgaagatgaagagggggaggaggaggttgtaggggtggagagagaggagaagcaa
gtggcaccagttcctcctgctgtggtgatcaagaaaccaccacaacagcgcatcaagaca
ctaaagctgtcggagataaccaaggcactggagccggaggagcgggaacgcagtgtggcg
ctggccgtggggcgcatcctgagggcagaacgctcttgcgcaaccctgagtggtgtctca
cccgtcaggaacaagatcctcacagtaatagcagcacagtttgatgaaaatgttggagat
gctgtcagggatttcattcttgaagacttgaaaaatcgcacggatcttgcgttcgcatgg
ctgtatgaggagtacagttttatgcaaggtttcagtaggatgccttcctttttacgtacg
caaatcaaccctccagagtgggcctacaaccgattgctgtgtggtatgattcagagtttg
ctggagaaacaggacgcaaaggacagagatgtgttgatctctcggctctacctcgaagcc
cccctcatcacagaggaggcgacggagctccttcgccagctatgtggcgactgcaaccga
gcctctgttggactggggctgctccaggagttggtggtgcggcgtcccccacgccacctg
gtctacctcaaccttcttcttgtgtacacggctcatgagcacggggacatccgtaccaag
gccatcgaaggggtagttggcctgtatgaacgggcagagctaaggagcatcattgaagag
tatgccatcttctacctgggcttcctgaggttaccacagccacccgtagttctttttggc
gaggatagagggcggccaaacatcgagacccagtggagtgaggacattgtcaaagtttgc
ttgtacctctacctggccctgctccccatcaatgagaacctgatccatgaattggcacgt
gtgtatgtgcagacagttgctgatgtgaagagggtgattctgcgcttgctggaggcaccg
gtgcgtggcatgggcatggattcaccacagctgttgactcttgtcgaggagtgccccaag
ggtgcagagacacttgtcacgcgagtcatccacatcctaacagacaagacctcaccaagt
gcagagcttgtggccagagtgcgtgacctgtatcacaccagagtgtcagatgttcgtttc
ctgattcctgttttgaacggtctcaccaagaaggaagtgatggctgcccttccacggctc
atccgactgaatcctgttgtggtgaaagaggtgttcaatcgcttgctgggtactcactca
gagggtgccacttcaccattgacacctgccgagttgctagtcgccctgcacaacattgat
ccatccaaggctgatatgaagaccattattaaagcaacatcccagtgctttgcggagaag
caggtttacacgcaagaggtgttggccgtggtgatgcagcagctgatggagcagagcccc
ttgcccacgctgctcatgcgcactgtcattcagtcgctctccctctacccccgactcatc
ggattcgtcatgaacatcctccagagactcatcttgaagcaggtgtggaagcagaagaag
gtgtgggaggggttcatcaagtgctgccaacgaacaaagccccagagcttccaggtgctg
ctgcagttgccgcctgctcagctcagtgacgtcttcgataactcccctgacttgcgtcag
cccttgcaggcgcacgtcatggccctgacagaaaaccaacgcgcgcacatcccgcaggcg
atcatggacgtgctgatgggtgcctcgcgcctcgacctttcctccctcgatgcggatacg
gagccggtgtctcctgccgagctgacgattgatatgcgggaggaagagaacgaggactcg
tcgggaccgaacgctgagccagcgccgccaggggacgaagactga
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