Ischnura elegans (blue-tailed damselfly): 124158751
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Entry
124158751 CDS
T09104
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124158751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
iel03041
]
124158751
Enzymes [BR:
iel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124158751
Spliceosome [BR:
iel03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124158751
Complex B
124158751
Complex C
U2 SnRNP specific factors
124158751
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
MscL
Motif
Other DBs
NCBI-GeneID:
124158751
NCBI-ProteinID:
XP_046389981
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All DBs
Position
5:38400120..38419411
Genome browser
AA seq
780 aa
AA seq
DB search
MSYHRGGDGRPRGFGFFGFQLKRDSKGQLPPPPTSAVSKHGYSTMNAISQNALAASYGLP
RKRPKTEEEYFEEDDETTTTITSTTSNLEYIPAPGSPSFQQKEESDSEEDPLDAYMAGIE
NQVKKQSTAASEKEEKDKLSKGIRDDIEEEDDEESYYRYMEENPNAGVVDDESDQEIEYD
EDGNPIAPKKSKDIDPLPPVDHTTIEYADFEKNFYNVHEEIKSLSSQVVDDLRTKLGIKV
SGPSPPYPVTSFAHFGLDEGLMKAIRKSEYTQPTPIQAQAVPAALGGRDLIGIAKTGSGK
TAAFIWPMLVHIMDQKELEPGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQVVCCYGG
GSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLNRVTFLVLDEADRMFDMGFEPQVRS
ICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPIRIVQGDVGEANQDVTQIVKVLNLGGA
KWNWLLSRIVEFLSQGSVLIFVTKKANADELANNLKLKEYEVVLLHGDMDQTERNKVITQ
FKKNEVQILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRIGRTGRAGEKGTAYTLIT
EKDKEFAGHLVRNLEGVNQEVPKDLMDLAMQSAWFRKSRFKSGHGKKLNVGGRGLGYRER
PGLGASTTPEASHSGPAATLRIGSGVSSSSSGPLSAGTPEVTRPRTGPGSDRLSAMKAAF
RAQYQSQFTASTDESWQQTRHQPPPPPQPSSESASSGASTANNGRPAGERERRRKSRWDL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcatcggggaggagatggccggcctcgaggtttcggattttttggatttcaa
ctgaagcgtgactccaaggggcaacttcctccaccgcctactagtgcagttagtaagcat
gggtactccactatgaatgcgatcagccagaacgctttagctgcaagctatggccttccc
aggaagaggcctaaaaccgaagaagagtacttcgaggaagatgatgaaactaccaccacc
atcacgagtacaacgtccaatttggagtatattcctgctccaggaagtcctagtttccag
cagaaagaagaatctgactccgaagaagatcctttggacgcatatatggcagggattgaa
aatcaggtgaagaaacagagcactgctgccagtgaaaaagaagaaaaggataaattaagt
aaggggattcgagatgatatcgaagaagaagacgacgaagagtcatactataggtatatg
gaggagaatccaaacgctggagtggttgatgatgagtcagatcaagagattgagtatgat
gaggatgggaatccaattgcaccaaagaaatctaaggatattgatccattgcctccagtt
gaccatacaacaattgaatatgctgattttgaaaagaacttctacaatgttcacgaagaa
ataaaaagcctctcctctcaggttgtcgatgatttgaggacaaagcttggaataaaggtt
tctggaccatcacctccctatccagtgactagctttgctcattttggtctggacgaagga
ttaatgaaggcaatacgcaagtcggagtacactcagccgactccaattcaagctcaggcg
gttccagctgcccttggtggccgtgacttgatcggcatcgccaaaacaggtagtggtaaa
acagctgcattcatatggccaatgttggtgcatattatggatcagaaagagctggaaccg
ggagatggaccgattggtcttatcttagctcccaccagagaactctctcagcagatatac
caagaagcaaaaaagtttggaaaagtgtacaacatccaggtggtctgttgctatggaggt
ggctccaagtgggagcagtccaaagctttggaaggaggtgcagaaattgttgttgccacg
cctggtagaatgattgacttagtcaaaatgaaagccacaaacctgaaccgtgtaacattc
ttggttctggatgaagctgatcgcatgtttgacatgggttttgaacctcaagtgagatca
atttgcaatcatgtccgccctgatcgtcaaaccctcctcttcagtgcaacgtttaagaaa
agggttgaaaaattggcaagggatgtgctaacggatccaatcaggatagttcagggtgat
gttggagaggccaatcaagatgttactcaaatagttaaagtgttgaatcttggtggtgcc
aagtggaattggttgctatcgcgcattgtggagtttttatctcaaggcagtgtgctaatt
tttgtgaccaaaaaggccaatgctgatgaattggccaacaacttaaagttaaaagaatat
gaagtcgttctgctacatggtgatatggatcagactgaaagaaacaaagtcataacccaa
tttaagaagaatgaagtccagattttggttgctacagatgttgcagctcgtggtctggat
attcctcacattaggacagtcgtcaattttgatgtggcgagggatattgacacgcacact
caccgaattggtagaacaggtcgagctggagagaaaggtactgcatacacacttatcacc
gagaaagataaggaatttgctggccaccttgtgagaaacctagaaggtgtcaatcaagag
gttcccaaagacttaatggatcttgccatgcagagtgcctggttcaggaaaagcagattt
aagagtggacatggaaagaaattgaatgttggtgggaggggacttggttaccgagagcgt
cccggacttggcgcttcaacaacaccagaggcctcgcacagtggacctgctgctaccttg
aggattggttcaggagtgtcatcaagtagtagtggtccattgagtgccggtactccagaa
gtgacccgtcccagaactggtccaggaagcgatcgactctctgcgatgaaggcagcgttt
agagcccagtatcaaagtcagttcactgcatcaacggatgagtcatggcagcagacaagg
catcagcctccgccaccccctcaaccctcttcggagtcggcttcgtcaggagcatcgaca
gccaacaatggacggccagcgggagaaagggaaaggcgaaggaagagccgatgggatctg
tag
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