KEGG   Ischnura elegans (blue-tailed damselfly): 124159022
Entry
124159022         CDS       T09104                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
iel  Ischnura elegans (blue-tailed damselfly)
Pathway
iel03030  DNA replication
iel03410  Base excision repair
iel03420  Nucleotide excision repair
iel03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:iel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124159022
   03410 Base excision repair
    124159022
   03420 Nucleotide excision repair
    124159022
   03430 Mismatch repair
    124159022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:iel03032]
    124159022
   03036 Chromosome and associated proteins [BR:iel03036]
    124159022
   03400 DNA repair and recombination proteins [BR:iel03400]
    124159022
DNA replication proteins [BR:iel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124159022
  DNA Replication Termination Factors
   ELG1-RFC complex
    124159022
Chromosome and associated proteins [BR:iel03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124159022
DNA repair and recombination proteins [BR:iel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124159022
  Check point factors
   HRAD17(Rad24)-RFC complex
    124159022
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_16 AAA_14 AAA_22 RCF1-5-like_lid Mg_chelatase AAA_24 nSTAND3 AAA_11 DEAD AAA_19 RuvB_N AAA_5 AAA_assoc_2 Viral_helicase1 IstB_IS21 NTPase_1 DNAX_ATPase_lid ATPase_2 AAA_18 RNA_helicase MeaB AAA_28 AAA_25 AAA_30
Other DBs
NCBI-GeneID: 124159022
NCBI-ProteinID: XP_046390464
LinkDB
Position
5:68002509..68007698
AA seq 349 aa
MEVDDKPSCPTSADVGGQPAEVPSSQSATSSTPWIEKYRPKVFSDIVGNEEEVSRLETFA
STGNVPNIILSGPPGIGKTTTILCLARTLLGPNFRDAVLELNASNDRGIDTVRNKIKDFA
QRKVTLPVGKHKIIILDEADSMTDGAQQALRRTLEKYSNTTRYALACNNSEKIIEPIQSR
CAMIRFGILSDMQVLAKVLQVCQAEGISYTHDGLEAIVFTAQGDMRQALNNLQSTFNGFG
HISSENVFKVCDEPHPLLVKDMIKNCINGDIDPAYKILHHLWTLGYASEDIVGNIFRISK
NYDMPINLKLYFIQEIATTHLRISEGLTTLVQLSGLLARLCDKAKTVKS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggaagtggacgataaacctagctgcccaacttcagctgacgttgggggtcaacctgct
gaagttccctcttctcagtctgctacatcttctacgccatggattgagaaatatagaccc
aaagtattctcagacatcgttggaaatgaagaggaggtttcgagattggaaacattcgca
agcactggaaatgttccgaatattattttgagcggtcctccaggaattgggaagaccacc
acaatattgtgtttggcccgaactttacttggcccgaactttagagatgcagttttggaa
cttaatgcttcaaatgaccgtgggatagatactgtgcggaataaaataaaagatttcgca
caacgaaaggtcacattaccagttgggaaacacaagataatcattctggatgaagcagac
agtatgacagatggtgctcagcaagctctgcgtcgaaccctggaaaaatacagcaataca
acaagatatgctttggcttgcaacaattctgagaaaatcatagaaccgatacaatctaga
tgtgcaatgattcgatttggaattttatcagatatgcaggttttggccaaagttctccaa
gtctgccaggcagaaggaatttcttatacacatgatggactcgaagcaattgtttttact
gctcaaggagatatgaggcaagcattaaataacctgcagtccacattcaatggatttggc
catatcagcagtgaaaatgtttttaaggtttgtgatgaacctcatccacttcttgtaaag
gacatgattaaaaactgtattaatggagatattgatccagcatataagatattacatcac
ttatggacattagggtatgcatcagaagacatagtgggaaatatatttcgcatcagcaaa
aactatgacatgcccataaacttgaagctgtatttcattcaggaaatagctactactcat
ctgagaatttcagagggcttgacaacccttgtgcaattgtctggactacttgctaggttg
tgtgataaagcaaaaacagtcaagtcttga

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