Ischnura elegans (blue-tailed damselfly): 124159094
Help
Entry
124159094 CDS
T09104
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit Pan2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124159094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124159094
Enzymes [BR:
iel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
124159094
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124159094
mRNA degradation factors
3'-5' decay
Pan complex
124159094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
zf-CCCH_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
124159094
NCBI-ProteinID:
XP_046390591
LinkDB
All DBs
Position
5:complement(76951910..76983544)
Genome browser
AA seq
1279 aa
AA seq
DB search
MDFSGISHYDPTVGTNADDMLLYDGDASHYGGADFVPVSEHFVENFTESEFQETHTVLAD
GGDRFGVSAVAFDLQEELLWMGNQGGHLTSYYGLGMQKYTSFQVHATQEVRQIHPFETGV
LALSQTSLRCQMRRGIPIFTYNSENMEDMQCMLQVSPTSLLMGGHQDKLIEFDLAKVAET
NVRSVGENGCAILRQQVSGGRYICCGDPTGRVHLRDPYTLKVEHTIDAHTGSLSDLDIHA
NMLVTCGFSNRHGVMAVDRFMNAYDLRMMRAMTPISLALDPLLLRFLPLFSSRVCIVSNL
GQVQLVDTAALTQPGDMCVFQVNTGGAMCLTFDVSSSCQCLAFGDGGGSVHLFNSGGDHA
SFNSFSQETEFADPVESIPPISILDENVPLATVPFPLCSTGALLSDWPERFLRPAFRRTP
AIDPQILQTMKMVGTVGYAPNPGNRKRNQVPYKLEKRGRSHKSFSSDTRPGKMGEDGSSV
MAIPRRYRKIEVKYSKMGADDFDFDLYNKTGFCGLEATLPNAYCNSMLQVLHYIDPVRSI
LLSHLCQKEFCLSCELGFLFHMLDISHGFPCQASNFLRAFRTIPEASALGLILSDQGESK
KKTDLIRLIQSWNRFILHQMHFEILEERKRKQFETQQMYLRSESPVLPDQFVYKEKDFPS
ISGDMQPKVDKTNSDEEKENGPEEKKKGKDKPEIGEENPNEETDISRLFGTRLKNINKCL
KCGNEVIKESSLLLCNLIYPDLSSGKNNKEYNFSDILHQSLCPEQTTPAWCDHCSRYQPT
HQSRRIQALPNILVNNCGMESQKDKTFWQTQMDLLVQKAQQNIGNTEDQLNPNVKQCRYG
SNCTRAGCRFRHAGRAETKTTSSSHLYYSNSWLPLHIQIDLMESGSLRIKKIEPPPCVNS
RPKTEEQKADDEKALADKEKSEEETTIEDNEGEDGCVIQSVVYDLCSVVCHIHDQASIKD
KKDHLVALVKAGPGYHIRSVGSPVSQWYIFNDFSIMPIVAQEVVWFNLEWKIPCVLYWIR
SDLPPDFVPPIRNPISLDVFGEDKCLARNGGRKMITFTPLAADEMPSEGEIVAMDAEFVT
LNQEEAELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYKTKFS
GIKPGDLDANFSSKHLTTLKSTYQKLRFLVDNGVKFVGHGLKNDFRVINLVVPAEQVIDT
VILFHMPHHRMVSLRFLAWHFLGVKIQSITHDSIEDARAALQLYQEHTRLQAEGKASAAL
KVLYEVGKKLQWRVPECND
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagtggtattagtcattacgaccctactgttggcaccaacgccgatgatatg
cttctttatgatggtgatgcatcgcattatggaggtgccgacttcgttccggtctcagaa
cactttgtggagaattttacagaatcagagtttcaggaaacccacacagttcttgctgat
ggtggagatagatttggtgtttctgctgttgcatttgatcttcaggaggaattgctttgg
atgggaaatcaagggggtcacttgacttcctattatggcttaggaatgcagaaatacacg
tcttttcaagtgcatgctacacaggaggttcgtcaaatccatccatttgaaaccggagtt
cttgcattgagccaaaccagcctacgctgccagatgagaagaggaatccctatatttacc
tacaattctgaaaatatggaggatatgcagtgtatgctccaagtatctcctacatccctc
ctcatgggtggacatcaagacaaattgatcgaattcgacttggctaaagttgcagaaact
aatgtgagaagtgtgggagagaatggatgcgcaattttgcgtcagcaagttagtggaggg
aggtacatctgctgcggtgaccccaccggtagagttcacctgagggacccgtacacactg
aaagtggaacataccatcgatgcgcacaccggaagtctctcagatttggacattcatgcc
aacatgctcgtcacttgtgggttttccaataggcatggtgtcatggctgtggatcgcttt
atgaatgcgtatgatctcaggatgatgcgggctatgactcctatcagcttggcattagac
cctcttctccttcgattcctgccactgttttcctcgagggtttgcattgtctcaaatttg
gggcaggtccagttagttgatactgctgctctcacccaacctggggatatgtgtgttttc
caggtcaatactggtggagccatgtgtctgacttttgatgtgtcatcatcgtgtcagtgt
ttggcctttggggatggtggcggctctgtgcatttatttaactctggtggagatcatgct
tcgttcaactctttctcacaggagacagaatttgctgacccagtggaaagcattccccca
atcagcatactcgatgaaaacgttccacttgcaactgttccctttcctttatgctccact
ggggcccttctttcagattggcctgaaaggtttttaaggccagcattcaggagaactcct
gctattgatcctcaaattcttcaaacaatgaaaatggtgggcaccgttggctatgctcca
aatcctggaaatcgcaagagaaatcaagttccgtataaattggagaaacgaggtagaagt
cataaatctttttccagcgatactcgacctggcaagatgggggaagatggaagttccgtg
atggccatcccgagaaggtaccgtaagatcgaggtgaagtattccaaaatgggagcggat
gattttgattttgacctctataataaaactggtttttgtggcctcgaagccactttgcct
aatgcgtactgcaattcaatgttacaggtattgcactatatagatcctgtacgctccata
cttctatctcatctgtgtcagaaagaattttgtttatcctgtgaacttggcttccttttt
cacatgctggatatatctcatggttttccgtgtcaagctagcaattttctgcgagctttc
cgtaccattccagaagcctctgctcttggtctgattctttctgatcaaggggagtctaag
aagaaaactgatctcattcgcttaatacagagttggaataggttcattctgcatcagatg
cattttgaaattttggaagaaaggaagaggaagcagtttgaaacccagcaaatgtactta
cgatccgaatctccggttctccctgatcagtttgtgtataaagaaaaggacttcccttca
atatctggagatatgcagcccaaggtggataaaactaattctgatgaagaaaaagaaaat
ggaccagaagagaagaaaaaaggaaaggacaagccggaaattggtgaagaaaatcctaat
gaggaaacagatattagtcgtctatttggaacgagacttaaaaatataaacaaatgcctc
aagtgtggaaatgaagttattaaagagtcttctctattgctgtgcaacctcatatatcct
gacctgtcatcaggaaagaataacaaagaatataatttttctgatattcttcatcaaagt
ctatgccctgaacagacaacacctgcatggtgtgatcactgctcaaggtatcaacccacc
caccagtcaaggagaatacaagctcttccaaatatccttgttaacaattgtggtatggaa
agtcagaaagacaagactttctggcagactcagatggacctacttgttcagaaagctcag
caaaatataggcaatactgaggaccaactaaatccaaacgtgaagcaatgtcgctatggg
tccaattgtaccagagctggctgccgttttaggcatgcaggaagagcagaaactaagacc
acatctagctcacatctgtattatagtaattcatggttgcctctacacatccaaattgac
ttgatggaaagtggatctctgaggataaagaaaattgaaccacctccttgtgttaatagt
cggcctaaaacagaggaacagaaggctgatgatgaaaaggcactggcagacaaagaaaaa
tctgaagaagaaaccacaattgaagacaatgaaggagaggatgggtgtgttattcagtct
gttgtttatgatctgtgttctgtggtgtgccatatacatgaccaagcaagtatcaaggac
aagaaggaccatttagtggcccttgtgaaagctgggcctggatatcacatacgctctgtt
ggttctccagtcagtcagtggtatattttcaatgatttcagtattatgcccattgttgcc
caggaagttgtgtggttcaacttggagtggaagattccctgtgttctctattggatacgg
agtgatcttcctcctgattttgtgcctccaatacgtaatcctatatctttggatgtattt
ggagaagacaaatgcctggcaagaaatggaggccgcaaaatgataacatttacaccttta
gctgcagatgagatgccatcagaaggtgaaatagttgcaatggatgctgaatttgtaaca
ttaaatcaggaagaagctgaacttcgaagtgatggaaagatgtcaacaattaagccatca
catatgtctgttgctcgtatcacatgcattcgagggcaaggacctcttgaaggcactcca
ttcattgatgattacatatccactcaagagcaggttgttgactacaaaacaaaattctct
ggcatcaagcctggtgacttggatgccaatttcagctcaaaacatctcacaactcttaag
tcaacatatcagaaacttcgctttctagttgacaatggagtcaaatttgttggtcatggg
ctcaaaaatgatttcagagttatcaacttggttgttcctgccgaacaagttattgataca
gttatactattccatatgcctcatcatagaatggtatcactacgttttctggcctggcac
tttttaggtgtgaaaattcagtcaatcactcacgattccatagaggatgccagggcagca
ttacaattgtaccaagaacacactcgattgcaagcagaaggcaaggcgtctgctgctttg
aaagttctatatgaagttgggaaaaagctccagtggcgtgttcctgaatgcaatgactga
DBGET
integrated database retrieval system
