KEGG   Ischnura elegans (blue-tailed damselfly): 124165307
Entry
124165307         CDS       T09104                                 
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
iel  Ischnura elegans (blue-tailed damselfly)
Pathway
iel03030  DNA replication
iel03410  Base excision repair
iel03420  Nucleotide excision repair
iel03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:iel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124165307 (DNAlig1)
   03410 Base excision repair
    124165307 (DNAlig1)
   03420 Nucleotide excision repair
    124165307 (DNAlig1)
   03430 Mismatch repair
    124165307 (DNAlig1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:iel03032]
    124165307 (DNAlig1)
   03400 DNA repair and recombination proteins [BR:iel03400]
    124165307 (DNAlig1)
Enzymes [BR:iel01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     124165307 (DNAlig1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     124165307 (DNAlig1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     124165307 (DNAlig1)
DNA replication proteins [BR:iel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    124165307 (DNAlig1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     124165307 (DNAlig1)
DNA repair and recombination proteins [BR:iel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     124165307 (DNAlig1)
   NER (nucleotide excision repair)
    Other NER factors
     124165307 (DNAlig1)
   MMR (mismatch excision repair)
    Other MMR factors
     124165307 (DNAlig1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 124165307
NCBI-ProteinID: XP_046398615
LinkDB
Position
9:complement(69904853..69950956)
AA seq 1101 aa
MSQKSITTFFTRVSNAETKKPEDVSDCNLAKPGTSKQIKHEKKESPTSKETARKRKRSKD
DDGDTKSKSSRTPMQDLPEPTNDKNQQGPSSVKPSPTKSPVSALSSASKAKPSVGAKSIM
DIMMQNAKKKPVQEKKEATEEKDKEIEEKESTEKMTNEKKERPSKGKKMSPARSKGKKSV
SVEEEEEAMDVDVSPPPKDKKSPKGTGKGRGRPKGKKSSQGETLKVDVLKKEASTEEVEK
SEDEEVKKEPSPEPVEKTCEASDDEDIPKVSKKRRSRRVSSSSEDDEEKEEPKPSSSESP
SKKEESSGKPSHPFFGERTRRSQFVTLCKQCELTKCSPEGACKAVPKKANEKVTVGKEKQ
YDPSKSSYHPVDDAIWSKGESVPYLALARTLELIEGTSARLKIIDIMANFLRSVIVLSPE
DLLPSLYLCLNRLAPAWEGQELGVAETTLMRAVAQSTGRTLSGVKEEAVKKGDLGLVAEG
ARGSQSKLAFTSMASSSRLTLKKVMSELKTIAGLSGQAAMSKKLYRIVSLFVACRGPEMR
YLVRSLSGKLRVGLAEQSVLQALALACSLTPPAQKSDSFPPPVLDASNGRGMASDAFKSK
VDANALLVKTAYCECPSFERLVDALLDGGVECLPERCQLSPGLPPKPMLAHPTKGVAEVL
TRFDNRTFTCEYKYDGERSQIHLLEDGSVKIFSRNQEDNTTKYPDVIGRLRTCFRTLKEK
VEEEDRLASEETKKSAVDGEKLDEKDEESSSAESGADDVKSSAKEKDSSVEGSEKVKVES
NEGEEEETVVKTCILDCEAVAWDVETECILPFQKLATRKRKDADESEIKVQVCLFMFDLL
YLNGKSLVTETLATRRHLLRTHFKAVSGHFHFANSVDTSSTEEVEAFLDDAVKGNCEGLM
VKTLHEEATYQIARRSRNWLKLKKDYLEGGSGIGDSLDLVVIGGYPGKGKRTGNYGGFLL
ACYDPESESYQTICKIGTGFSEEDLASLSETLRPNVIPEPRPYYSISPGLHPPPRDWFDA
TVVWEVKCADLSLSPVHRAGIGLVDPEKGISLRFPRFKRVRDDKKPEEATSSEQIAEMYN
GQEQVKNSTQSKTTLTEEDFY
NT seq 3306 nt   +upstreamnt  +downstreamnt
atgtcccagaaaagcataacgacttttttcacccgagtttccaatgctgaaaccaagaag
cccgaagatgtatcggactgtaacttggcgaaaccaggaacttcaaagcaaataaaacat
gaaaagaaagagagtccaactagcaaagaaactgcaaggaaaaggaagaggagcaaagat
gatgatggggataccaaatccaaaagctctagaacacccatgcaagatttgcctgaaccg
acaaatgataagaaccaacagggcccatcttctgttaaaccttccccaactaaaagccca
gtttctgctttgagttcagcctccaaagctaaaccatctgtgggtgctaagtccataatg
gatatcatgatgcagaatgcaaagaaaaaaccagtgcaggagaagaaagaggccaccgag
gaaaaagataaggaaattgaagaaaaggaaagtacagaaaaaatgacaaatgagaagaag
gaaagaccttctaaaggaaagaagatgtctcctgctagatcgaaggggaagaaatctgtt
tctgtggaagaggaggaagaagctatggatgtggatgtctcacctcctccaaaggataag
aaatctcccaaagggacaggaaaggggagggggagaccaaaaggaaagaaaagcagtcaa
ggtgagacgctgaaagtggatgtgttgaagaaggaagcaagcaccgaggaggttgagaag
tcggaagatgaggaggtgaagaaagagccttcccctgaaccagtagaaaagacttgcgag
gcaagtgatgacgaggacatccctaaagtttccaagaagaggaggtcaaggagggtgtca
tcgtcttccgaagatgatgaggagaaagaggagcctaaaccctcatcttcggaatctccc
agtaagaaagaagaaagcagtgggaagcccagtcatccattctttggtgagcggactaga
agatcccaatttgttacgctgtgcaagcaatgtgagctgacaaaatgttctcctgaagga
gcatgcaaagcagtacctaagaaggctaatgaaaaagtcactgtgggaaaagaaaagcaa
tatgatccatcaaaatcgagttaccatcctgttgatgatgccatttggtccaaaggtgaa
agtgttccttacctggctctagctagaactttggagctgattgaaggaaccagtgcgagg
ctgaagataattgatataatggctaattttttgcggtctgtaattgtcttaagtcctgag
gacctacttcccagcctctacctatgtctcaatcgacttgctccagcttgggaaggtcaa
gaattgggagtggctgaaacaacattaatgcgtgctgtggcacagagcactggccgcaca
ttatctggtgtcaaagaagaagctgtaaagaaaggagatttggggctggtggcagaaggc
gcaagagggagtcagagtaaactggctttcactagcatggcgagtagctctaggctaaca
ctgaagaaagttatgtccgagttgaagacgattgctggtcttagtgggcaagctgcaatg
tctaaaaaattgtaccgtatagtttctttgtttgtggcatgtcgtggcccagaaatgcgg
tatcttgtgcgctcactatcggggaagttgagggttggattggcagagcagtctgtttta
caggccctggcattggcatgctctttaactccacctgctcagaaaagtgactcatttcca
ccccctgtattagatgcctctaacggtcgaggaatggcatctgatgcatttaaatcaaag
gttgacgcaaatgccctcttagtgaaaacagcctattgtgaatgcccctcatttgagagg
ttagttgatgccctccttgatggtggcgttgaatgtctaccagagcgttgccaattatct
ccaggtctacctccaaagcctatgttggcacatcctacaaaaggtgtggctgaagtcctg
actcgttttgacaatcgcacattcacttgcgagtacaaatatgatggagaaagatctcag
attcacctcctggaagatggtagtgttaaaatatttagccgaaatcaggaggacaataca
accaaatatccagatgttataggtcggttgagaacatgttttaggacactaaaggagaag
gttgaagaagaagacaggttagcaagtgaggaaaccaagaaaagtgctgttgatggtgaa
aagttagatgagaaggatgaagaatcttctagtgctgaatcaggggctgatgatgtaaaa
agttcagcgaaggaaaaagacagtagtgttgagggcagtgaaaaagttaaagttgaaagt
aatgaaggtgaagaggaagagactgttgttaaaacttgcatcttggactgtgaagctgta
gcatgggatgtggaaaccgagtgcatcttacctttccaaaaattggcaacacgcaaaaga
aaggatgcagatgaatctgaaatcaaagttcaagtgtgcctatttatgtttgacttgctg
taccttaatggaaaatccttggtcactgaaacgttagcaactcgacggcaccttctccgc
acccattttaaggcagtaagtggccactttcattttgccaattcagtggacacatcttct
accgaggaagtggaagcttttcttgatgacgctgtgaagggtaattgtgaagggttaatg
gtcaagacattgcatgaagaagcaacataccaaattgcccgcaggtcaaggaactggttg
aaactcaagaaagattatttggaagggggcagtggtattggtgattctctagatttggtg
gtgattggtggttatcccggcaaaggaaagagaacaggaaactatggtggattccttttg
gcctgctatgatccagaaagtgaatcctaccaaaccatttgcaagatcgggactggtttc
agtgaagaagatcttgcttccctctctgaaactcttcggccaaacgtcattccagaacct
aggccctactactccatatcgcctggtcttcatccacctccaagagattggtttgatgcc
acagttgtttgggaggtgaaatgtgccgatctctctctgtcacctgtgcaccgtgcagga
attggactggttgacccagagaaaggaatttctcttcgatttccacgttttaagcgtgtt
cgagatgacaagaagcctgaggaagcaacctcttctgagcagattgctgaaatgtacaat
gggcaggagcaagtcaaaaatagtactcagtccaagaccaccttgacagaagaagacttc
tattaa

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