Ischnura elegans (blue-tailed damselfly): 124167374
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Entry
124167374 CDS
T09104
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03013
Nucleocytoplasmic transport
iel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124167374
03015 mRNA surveillance pathway
124167374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124167374
Enzymes [BR:
iel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124167374
5.6.2.5 RNA 5'-3' helicase
124167374
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124167374
mRNA cycle factors
Common to processing body (P body) and stress granule
124167374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
DEAD
UvrD-helicase
NPHP3_N
ATPase
NAT10_TcmA_helicase
nSTAND3
AAA_16
SRP54
AAA_22
AAA_32
Motif
Other DBs
NCBI-GeneID:
124167374
NCBI-ProteinID:
XP_046401348
LinkDB
All DBs
Position
10:97759935..97802054
Genome browser
AA seq
1142 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEEGDLIGADTQGSEFDFTDFTLPSQSQTQASQLDVGQSHPPQ
VQVNGDIGKNGLDADVAATTQTLRELQFEEDEEEAYYTKDLPEFACKYCGIHDPSCVVMC
NICKKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYSCGVRNVFVLGFI
PAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLSWLVKLPSEQEQLRARQI
SAQQINKLEELWKDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYD
KKLKESQTQDNIEVRWDVGLNKKTISYFTLAKTDGDMKLMHGDELRLRYLGEMHKPWSGV
GHVIKIPDNFGEEVGIELKNNCGAPTECTSNFVLDFIWKSTSFDRMQLALKKFAVDDTSV
SGYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTG
KTVTSATIVYQLVKQTGGGPVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPV
SFLALHNQIRSIDSNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT
CVGAGDPRLARLKFSSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA
RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCSDERRLKGID
FPWPQPEKPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLRCGVKPEQIGIITPY
EGQRAYLVQYMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP
RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLTNLKESVIQFAKP
KKLVNAANPGTHFMSTTVFDAREAMVPGSVYDRTGHMNGGNNSGGGVSLTASASPYFPRQ
GANPLDPYSRTHDPISYISPERAQAAMTNIPVPVGMFMNMAHVPPRFYNQHQQALQARQN
QRNKAANRSKTKNIRTAAKSGAGQLNQGLNSQDATQPYSQGVPLTQGMSQGMSQPVGGAT
AAFSLSQPGLSQAELSQDSYMVGEFQSQMDGLLSQDSTYQGDRSNTAFYPTTSQGGQFSQ
PY
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgatgcgtatggtccgagttctcaaacgctaacttttctggatacggaggaa
ggagatttaatcggcgctgatactcaaggatctgagtttgacttcacagattttactctg
ccttcacaaagtcaaacacaggcatctcagttagatgttggacaaagccatcctcctcag
gttcaggtaaatggcgatattggcaaaaacggtttggatgctgatgttgccgctacgacg
caaacattgcgcgagttgcagtttgaggaagatgaggaagaagcatactacacgaaggat
ttgcccgagttcgcctgcaagtactgtgggatacatgaccccagttgcgtggtgatgtgc
aacatatgcaagaaatggttctgcaatgggcggggaaatacgtctggatcgcacataatc
aatcatttagtccgagctaagcataaggaggtgacgctgcacaaagatggccccttggga
gagacggtgcttgagtgctactcatgtggtgtcaggaacgtgtttgtgttgggtttcatc
ccagccaaggctgactctgtggtcgtcctcctgtgcaggcagccatgtgcagcccagaac
tccttgaaagatatgaactgggatcaggagcagtggaagcccctgattgccgatcgctgc
tttctctcatggcttgtcaaactcccgtctgaacaagagcagctccgtgccaggcaaata
tccgctcagcagataaacaagcttgaagaactctggaaggacaatgtggatgcaacattc
caagatttggagaagcctggtgtggacgaggagccccagcaggtactcctcaggtatgag
gatggttatcaataccagaatatctttgggccattggtcaaactggaggctgattatgac
aagaagctgaaggagtcgcagacgcaggacaacattgaagtccggtgggatgttggattg
aacaagaagactatttcttacttcacccttgccaaaactgatggagatatgaagctaatg
catggagatgaattaaggctgcggtatttaggtgaaatgcacaagccgtggtctggtgtt
ggacacgtgattaagattccagacaactttggtgaggaagtcggcattgagcttaagaac
aactgtggagcccctacagagtgcacatccaactttgttttggatttcatctggaagagc
acctcatttgacaggatgcagctggcactgaagaagtttgctgttgatgacacatccgtc
tcgggatacatctaccaccgtctcctcggacatgaagtggaggaggtgctgttcaggtgt
cacttgcccaagcacttctcggctcccaacctcccggatctcaaccgctcgcaggtgtat
gcggtgaagcacgctttgcagaggccactttcgctcatccaaggtcctcctggaactggg
aaaactgtgacgtcagccacgatagtgtatcagcttgtgaaacaaactggaggtggtccc
gtactcgtttgcgccccgtcaaacattgctgttgaccagctcactgagaagatacacaga
accgggttgaaggtggtccgcctgtgtgcaaagtctcgggaagccatcgattctccagtc
tcatttttggctcttcacaatcaaatccgtagcattgatagcaatactgagctccagaag
ctgcagcaactgaaggacgaaacaggcgagctttcgtctgtggatgagaagcgctatcgg
ctgctgaagaaggcggccgagaaagagctgttggaagcggcagacgtgatctgctgcact
tgcgtgggtgctggcgaccctcgcctcgctcgcctcaagttctcatcgattctcattgac
gagagcatgcagtcgacggagccggagtgtatggtgcctgtggtgctaggtgccaagcag
ctcattctggttggtgaccactgccagctgggtcctgttgtcatgtgcaagaaggctgcc
agggctggtctctcgcagtctctgtttgagcgtctggttgtgctcggcatcaggccgttc
cgtcttgaggtgcagtaccgcatgcaccctgaactctctcgcttcccctcgaacttcttt
tatgagggttctctgcaaaatggagtctgttctgacgagaggaggttgaagggaatcgac
ttcccgtggccccagccggagaaacccatgtttttctacgtgacacaggggcaggaagaa
attgctggctctggtacttcatatttgaatcgtacagaggctgcaaatgtggagaagctg
accactcgttttctgagatgtggagtcaaaccagagcaaataggcatcatcacgccatac
gaagggcagcgagcctacttggtccagtacatgcagtaccaagggtcgttacatgcaaag
ctctaccaagagattgaagtagccagtgtggatgcatttcaggggcgggagaaggacatc
atcattatgtcttgtgtgaggtcgaacgagcaccaaggcattggtttcctgaatgaccca
aggcgactcaacgtcgccctgaccagggcaaagtatggaataatcattgtgggaaaccca
aaagtcctgtctaagcaacctctttggaaccacctgctcaacttctacaaggagcagaag
gtgcttgttgagggtcccttgactaacctgaaggaatcagtcatccaatttgccaagccc
aagaagctggtgaatgcagccaatccaggcacgcatttcatgtcgacgactgtgtttgac
gcgcgggaggcgatggttccgggcagcgtgtatgaccgaacgggccacatgaacgggggc
aacaacagtggaggcggagtgtccctcaccgcctctgccagcccctacttccctcgtcaa
ggtgcgaatcccttggacccatatagcagaacgcatgatccaatcagctacatatcaccg
gagagggctcaagcagctatgaccaacattcctgttccagttggaatgttcatgaacatg
gctcatgttcctccaaggttctacaaccagcaccaacaagctctgcaagcacgacagaat
cagaggaacaaggcagccaatcgcagcaaaacgaagaacatccgcacggctgccaagagt
ggtgctggccagctgaatcaaggactaaatagccaggacgccacgcagccctacagccaa
ggtgtgcctctcactcaggggatgtcacagggcatgtcacagcctgttggcggggcgacg
gccgccttcagcttgtcgcagcctggcctgtcgcaggctgagctctcgcaggacagctac
atggtgggtgagttccagtcgcaaatggacggcctcctgtcgcaggactccacctaccaa
ggggaccgctccaacactgccttctacccgaccacatcgcagggtgggcagttctcccag
ccatactga
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integrated database retrieval system
