Ischnura elegans (blue-tailed damselfly): 124167923
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Entry
124167923 CDS
T09104
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124167923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124167923
Enzymes [BR:
iel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124167923
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124167923
mRNA degradation factors
3'-5' decay
Ski complex
124167923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4_beta-barrel
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
124167923
NCBI-ProteinID:
XP_046401942
LinkDB
All DBs
Position
11:27962532..27993980
Genome browser
AA seq
1356 aa
AA seq
DB search
MSNSLNNEAEVKVQLPFGPPPVLPDVKKELQSYLLCTDKLPIHDFRNSQRFWKRTPNPTS
LYDVSLSPLGTTLKVERDPTTGELLGFREVVLRDVGAHARNSASLSRAPGPPEEAIRGSV
SNVPFWPAGIPKPPSRQDMQIKKAEDGGIDFDNDLITCPPGMSRGYEFEEPAVEKPKEEA
RNEGREEGEKESKEAEEVKTPAEKVAAEEEEEEEKEEVNLAAVLQQEQNIWSAWNKGEGK
VAKEEDVDKENRPSVLNAAQQQSKEDLEKVIPKEDNIPILNISKPVKQLKQTATKWAEVI
DMSQPVLDFRQRLPIMAHEWHFELDTFQKQAILLLEEKNHVFVSAHTSAGKTVVAEYAIA
LAMRNKTRVVYTSPIKALSNQKYRDFKTTFQDVGLITGDIQINQTASCLIMTTEILRSML
YRGSDTLRDLEFVIFDEVHYINDSERGHVWEEVLIQLQENVTIVMLSATVPNTLEFAQWV
GQTVGRKVYVISTLKRPVPLEHYLYTGTGGSTKENCFLILDSGGKFLSEGYHNAVESLKS
EKSPQANPQGKDFGGRGGGRGGGGGGGRGGGRGGGGGGRGGPPARTHKSNVPHYKMDPAA
AMKQEKTLWVALLDFLRKKDKLPVVIFTLSRKMCDQYAEALASQNLNTESERSRVHRFFK
HSLRLLKEPDRKLPQVMKMQELLEKGIGIHHSGILPILKEIVEIMFQERKVKVLFATETF
AMGVNMPARTVVFESHTKFDGLQTRPLLPAEYIQMAGRAGRRELDPTGTVIIMTKKGVPD
LETLKSMMMGKPTALSSKFRLTYSMILNLMKQRGVSITVEQMMSMSFREMWHKRQVEEVQ
TKLPEVESQLRALIEADTLEREKRALDEMKVASAEMIAKMEEFYSSASKFLEEWIYEMPV
IMRTSQAMKAIVPGRLMVISYGEYRQRLSVVLKNEITSSSTARAAKPFYVLHLCDDEDTP
EDDSEINLVDTQIKYPTQAKKKTAAETETDEQEEHWNKLLSLANPKIFYPEESMLMHGNH
IVTWVRPGDILHIVDIVIKIEVDRVMADWDKRQIPRFRNDPPGPSCAHVIRELTQLTLDV
SSGLKTLPLLNPLTDIGIKDIKMFRIMEPINVMKSDVNKFDFSKALSFEDQFKILFKKKW
LEDRKSKLEFMKSHESLSLYPEYCARVRVLRELGYIDHNNHVEMKGRAACQLSSNNQELI
LTEIIFQHVFNSMEPTEMAALLSALMFQAKTNVEPQLTKVLEEGKKTIEEIEKQVNKMQI
DCGLEQGEMMNDSKLNFGLVEVVYEWALNKPFAEIVPLTDVQEGIIVRCIVQLNEMLQDM
KKVANTFGDVTLVAKFEEASQAIKRDIVFAASLYTE
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcattgaataatgaagcggaagtgaaagtgcagttacccttcggacctccc
ccagttcttccagacgtgaaaaaggaattgcaatcatatctactatgcacagacaagtta
ccgattcatgattttagaaattcgcaacgcttttggaagaggactccaaatccaacatct
ctgtacgatgtgagcctgtcccctctagggacaacactcaaggttgagagggaccccacc
actggtgagcttctgggttttagagaagttgtccttcgtgatgttggtgcccatgctaga
aattcagcctctctctcccgtgctcctggacctcccgaagaagctatccgagggagtgtt
tcaaatgtcccattctggcctgcaggaatacctaagccaccatctagacaggatatgcaa
atcaaaaaagctgaagatggaggaatcgactttgacaacgaccttattacctgtccaccg
ggtatgtctcggggttatgagtttgaagagcctgcagtcgagaaaccaaaggaagaggct
cggaatgaggggagggaagagggtgagaaagagtcgaaagaagcagaagaagtgaagact
cctgcagagaaggttgcagcggaagaagaagaggaggaggagaaggaagaggtgaacttg
gccgcagttcttcagcaggagcagaacatttggagtgcatggaacaaaggggagggaaaa
gtggccaaagaggaagatgtggacaaagagaaccggccgagtgtgcttaatgctgcccag
cagcagagcaaggaggacttggagaaggtcatcccaaaggaggacaacattccaattctc
aacatcagtaagcctgtaaagcagttgaagcaaactgcaaccaaatgggcagaagtcatt
gatatgtctcagcctgttttggatttcaggcaaaggctccctatcatggcccatgaatgg
cattttgaactagacacatttcagaagcaggctattctacttttggaagagaaaaaccat
gtgtttgtgtctgcacacacctcagcgggtaagactgtagtcgctgaatatgccatcgcc
ctggctatgaggaataaaactagagttgtgtacacatctccaattaaggctctctccaat
cagaagtatcgtgacttcaaaacaacatttcaggatgttggcctcattactggtgacatt
caaataaaccaaacagcttcatgccttattatgactacagagattcttcgttcaatgctg
tatcgtggaagtgatactctcagggatttggaatttgttatttttgatgaagttcattat
attaacgattctgagcggggtcatgtgtgggaggaggtgttgattcagcttcaagaaaat
gtgactattgtcatgctcagtgcaacagtgccaaacacattggagtttgctcagtgggtt
gggcagactgtaggaaggaaagtgtatgtgattagtacattgaagcgtccagtgccttta
gaacattatctttatactggaaccggtggttctacaaaggagaactgtttcctaatttta
gattccggtggaaaattcttgtctgaagggtatcacaatgctgtggagtctttgaaatca
gagaagtctcctcaggcaaatcctcaggggaaagactttggtggtcgagggggtggcaga
gggggtggtggagggggaggcagaggaggaggaagaggaggtgggggtggtggtaggggt
gggcccccagcgaggactcacaagagcaacgtgccccattacaagatggaccccgcagca
gcaatgaagcaggagaagactttgtgggtggccctgctggatttcctccggaagaaggat
aagctgccggtggttatattcacgctgtcaaggaagatgtgtgatcagtatgcagaggca
cttgcgtcacagaatctgaacactgagtcagagaggagcagggttcatcgctttttcaag
cactccctgcgactgctaaaagagcccgataggaaattgccccaggtcatgaaaatgcaa
gagctattagagaaaggaattgggatacatcacagtgggattcttcctatccttaaggaa
attgttgaaatcatgttccaagaaaggaaagtgaaggttttgtttgccactgaaacattt
gccatgggagtgaacatgcctgcccgtactgtggtgtttgagtctcacacaaaatttgat
ggtctgcaaacgaggcctctcttgccggctgagtacatacaaatggctggcagagctggt
cggagagagcttgatcccacaggaacagtcataataatgaccaagaagggcgttcctgac
cttgaaactctcaagtccatgatgatgggcaagcctacagctttgagttctaagttccgc
ctcacatattcaatgatcctcaatttgatgaagcagaggggtgtgtcaatcacggtggag
cagatgatgtccatgtcgtttagagagatgtggcacaagaggcaggtggaggaggttcaa
accaagctgccagaggtggagtcacagttgagggctctgattgaggcagatacgcttgag
agggagaagagagcactggatgagatgaaggtggcgtcagcagaaatgatcgccaagatg
gaagagttctactcgtctgcatcaaagttccttgaggagtggatttatgaaatgcctgtg
ataatgaggacaagccaggcaatgaaagcaattgttcctggtcgcttaatggtcatatct
tatggagaatatcgtcaacgcctctcagtggtactcaagaatgagatcacctcatcatct
actgctagggcagcaaagccgttctatgtccttcatttgtgtgatgatgaagatacccct
gaggatgactcagaaatcaatcttgtagacactcaaattaaatatcccacgcaggcaaag
aagaagacagcagccgagacagagactgatgagcaggaagagcattggaataagcttctc
tcattggccaacccaaagatcttctatccagaagagtctatgctcatgcacggaaaccac
attgttacctgggtgagacctggggacattcttcacattgttgatattgtcatcaagatt
gaggttgatcgggttatggcagactgggacaagaggcaaataccaaggtttagaaatgat
cccccagggccttcatgtgcacatgtgatcagggaacttactcagttaacacttgatgta
tcatctggtctcaaaactctgccattgctcaatccactcacagatataggaatcaaggat
atcaaaatgttcaggatcatggagcccattaatgttatgaaatcagatgtcaacaagttc
gacttcagtaaagctttgagctttgaggatcagttcaaaatactcttcaagaagaagtgg
cttgaggacaggaaatctaaattggaattcatgaaatcccatgagagcctttcactctac
ccagagtattgtgcgagggtgcgagtgttaagggaactaggttacatcgaccacaacaat
catgtggaaatgaaagggagagcagcatgccaacttagcagcaacaaccaagaacttatc
ctgacggagatcatattccaacatgttttcaacagcatggagcccacggagatggctgcc
ctcctatcagcgttgatgttccaagcaaaaaccaatgttgagccccagctcacgaaagtt
cttgaggagggtaaaaagactatagaggaaattgaaaagcaagtgaacaagatgcagata
gattgtggattggagcaaggggaaatgatgaacgattcaaagctgaattttggcctagtt
gaagttgtgtatgaatgggccttgaacaagccttttgcagaaatagttccactcactgat
gtgcaagagggaatcattgtgaggtgtatagtgcagctgaatgaaatgctgcaggacatg
aagaaagttgcaaacacatttggtgatgtcacccttgttgccaagtttgaagaagcaagc
caagctataaaacgtgatattgtttttgcagcaagtttgtatacagaataa
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integrated database retrieval system
