Ischnura elegans (blue-tailed damselfly): 124168010
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Entry
124168010 CDS
T09104
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124168010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124168010
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124168010
U7-dependent histone pre-mRNA processing factors
124168010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124168010
NCBI-ProteinID:
XP_046402043
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Position
11:complement(41357799..41375419)
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AA seq
445 aa
AA seq
DB search
MADQSLMDKSLRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVYDRETGKPKGYGFCEY
KDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQSLLQGPVVENPYGDPVAPEKAP
EAISKAVASLPPEQMYELMKQMRLCIQNNPTEAHQMLLQNPQLAYALLQALVVMKVLDPH
TAASMLHKAPPAQTALYLPPEKAAAVTASSTVPIPTTIAPVPAPVPLPVRAPAVVPQPPR
PVIGVPPVSLTAPAVPPVPAPARIPAAAQDLDLRQMDPRAILMDQDLRSLHPVPVAALPV
APPIVPPVALRDPREREVPTEQIQHLENAEGFPRDPRNAAAIAPDRFPVRDPRPQASPAY
VEPRSDPRSKAAVPPPAPREPVTPAGPTRPIMPSSIAAGGATDQEKAALIMQVLQLSDDQ
ISMLPPEQRQSILVLKEQIAKSTQR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagtcgttgatggataaatccttgagatcggtgtttgtgggaaacattccg
tatgaagctaccgaagaaaagcttaaagacatttttagtgaagttggacctgttctttca
ttcaagctcgtgtatgacagggaaactgggaagccgaaaggttatggtttctgtgaatac
aaggatcaagaaactgctttgagtgcaatgcgtaatctgaatggctacgaaattggtgga
agaacgttaagagtggataatgcttgtacggagaagtcgagaatggaaatgcaaagctta
ttgcagggtccagtggtggaaaatccatatggtgatccagtggcccctgaaaaagctcca
gaggccattagcaaagcagtggcctcacttcccccagagcaaatgtatgaactcatgaag
cagatgaggttatgcattcagaataaccccacagaggcacatcagatgttacttcagaat
cctcagttagcatatgccctcctgcaagctttggtggtaatgaaagtacttgatccgcac
actgctgcgagcatgctacataaggcacctccagcacagactgcactgtaccttcctcca
gagaaagcagctgcagttactgcaagctccactgtgccaatacccactaccatcgcgcct
gtccctgcaccagtacccctgccagtgagggctccagctgttgtcccgcagccaccaagg
ccagttattggtgttcctcctgtgagtctcacagctcctgcagttcctccagtacctgct
ccagccaggatacctgcagctgctcaagaccttgatttgagacagatggacccaagagcc
atactaatggaccaagaccttagatctttgcatcctgttcctgtagctgccttgcctgtg
gctccaccaattgttcctcctgtggctttaagggatcctagggaaagagaagttcctact
gagcaaattcagcatttggaaaatgctgagggttttccaagagacccaagaaatgctgct
gcgatagcacctgatcgattccctgtcagagatccaagaccacaagcatcccctgcatat
gtggagccaagatctgatcctcgcagcaaagccgctgttcctccaccagccccaagggag
ccagtcactcctgctggaccgacccggcccattatgccttcttctattgcagcaggaggt
gccactgaccaggagaaggctgccctcatcatgcaagttttgcagctctcagatgaccag
atatcaatgctccctcctgagcagaggcaaagtatcttggtgctcaaggaacaaatagct
aaaagtactcaacgctaa
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