Ischnura elegans (blue-tailed damselfly): 124168889
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Entry
124168889 CDS
T09104
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03013
Nucleocytoplasmic transport
iel03015
mRNA surveillance pathway
iel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124168889
09122 Translation
03013 Nucleocytoplasmic transport
124168889
03015 mRNA surveillance pathway
124168889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124168889
03041 Spliceosome [BR:
iel03041
]
124168889
Enzymes [BR:
iel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124168889
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124168889
Spliceosome [BR:
iel03041
]
Complex C
Other components
EJC/TREX
124168889
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124168889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124168889
NCBI-ProteinID:
XP_046403221
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All DBs
Position
12:24084170..24090553
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQNETNVVDGSGDVATKKDVKGTYVSIHSSGFRDFLLKPEILRAIAD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEIADNQVHVLVMCHT
RELAFQISKEYERFSKYMPAIKVGVFFGGLPIQKDEEVLKNSCPHIVVGTPGRILALVSS
KKLVLKHLKHFILDECDKMLELLDMRRDVQEIFRNTPHGKQVMMFSATLSKDVRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMA
LAQLLIEQNFPAIAIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNDVQDRFDVNITELPDEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgacgatcttttggattacgaagatgaggagcaaaatgagactaatgtt
gtcgatggctcgggagacgtcgcaacaaagaaggacgttaagggaacttatgtttccatt
cacagctccggatttcgcgattttcttctcaagccggaaattctgagagctattgcagac
tgtggatttgagcatccgtctgaagttcagcacgagtgcattcctcaagctgttcttggg
atggatatcctgtgccaggccaagtctggtatgggtaaaacagctgtcttcgttctagcc
actctgcaacagctggaaatcgctgacaatcaggtccatgtgctcgttatgtgtcataca
agagaacttgcttttcaaatcagcaaggagtatgagcgtttctccaagtacatgccggcc
attaaggttggtgtgttttttggtggcctacctatccaaaaggatgaagaggtcctgaaa
aatagctgcccccacattgttgttggaactccaggtcgtattcttgccctggttagctcc
aagaagctggtgctgaagcatttaaaacacttcattcttgatgaatgcgacaaaatgttg
gagctactagatatgaggagagatgtgcaggaaatattccgcaacaccccacatggaaag
caagttatgatgtttagtgccacactcagcaaggacgtcaggcctgtttgcaagaaattt
atgcaagatcctatggaagtctatgttgatgatgaagcaaaacttactcttcatggtctg
cagcagcactatgtgaaattgaaggaaaatgagaagaataaaaagctgtttgaattactt
gatgttctggagttcaatcaggtggtcatttttgtgaaatctgttcaaagatgtatggcc
cttgcacagcttttaattgaacagaatttcccggccattgcaatacatcgaggtatgact
caggaggagagactttctcgctatcagcaatttaaggattttcaaaagagaattcttgtg
gctacgaatctctttggccgaggaatggatattgagcgtgttaatatagttttcaattat
gatatgcctgaagattctgatacttaccttcatagagtagctcgtgctggccgatttggg
accaagggattggctatcacctttgtaagtgacgagggtgatgccaaaattctgaatgat
gtacaagataggtttgatgttaacataaccgaattacctgatgaaattgacctttcctct
tacattgaaggacggtag
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