Ischnura elegans (blue-tailed damselfly): 124170743
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Entry
124170743 CDS
T09104
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03013
Nucleocytoplasmic transport
iel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124170743
03015 mRNA surveillance pathway
124170743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124170743
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124170743
mRNA cycle factors
P-body specific factors
124170743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
SHPRH_helical-2nd
Amidase
Motif
Other DBs
NCBI-GeneID:
124170743
NCBI-ProteinID:
XP_046405620
LinkDB
All DBs
Position
X:complement(53185754..53228604)
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AA seq
1253 aa
AA seq
DB search
MMAQKSDGMGLKKNRNLKKETESTSTPIQSSLGDGDEQEPGVGGTTNSDHQNGYGSNVNC
KTSIGSDDKNDAFIANGSKEDISMSCDLSEESEERPVEDKALLTAYIYDATSRLQEKTAL
RQKNQPGAFTRPDEKHLRNLDSSLKKNTAFVRKMKTFSASQADSLVKDMAALNLSKYISE
IAAALVESKLKMTDIPAAVSICCLLHRTYAEFSGFLLENWHKALAVKKDEPISNPSKLRV
DIRFYADLVNAGIFSFREGLALLGSVLTALIQGDKEEHKNINIILSFCKHCGEDYAGLVP
RRIRQLSEEYNMPLPKSDLLSPEKTKNVRQLLKDYYASLCRHLIKEHNELQAFERQNKRI
LQTKGELSGERRERLDTLQSSFEKLLTNTISFADILDEDIPELSLSEPLKHDDEAALKAG
AEVEEFPVGMALWDDEESKKFYESIPDLRSILPGLFPKDSTPTAEPKETECEPDTKQSEE
IKSVDSSEALITFNSGSPVEELDEHDSAANGSAKVVMDSFLTHLLNCINVEKIDNAAVEF
GLNLNTKYNRRKLVKALFAVPRTRFDLLPYYARMVAILNPCMPDIASELNFMLLQDFKYH
VKKKDQINIESKVKVIRFIGELVNFSVLSKVDALHCLKVLLQDFTHHFIEMACNLLETCG
RFLYRSQDSHQRTKIYLEQMMRKKAVLTLESRYVTMIENAYYHILPPEVSVTQKKKEKPV
KLAYIDKLLYQDLAKPTTDKVLRQMRKLNWDDNEVSLYAIKCLTQIWKYKYFNIRCVANM
VSGLVGHLEGIGVQVVDAVLEDIRMCMEIGHPKYNQRRIAMIMYLGELYNYRMVESGDIF
KVLYSLITFGVGRDHQTPSPLDPPENLFRIRLVCVLLETCGTYFSHGSSKKKLDCFFVYF
QNYFWYKYSHPFWNVNNPFPFGVMFMFKDVLTSLRPKIKLYESYGEAQYELMALESDLRL
RLTEVAPELISQDELDDAVHTDAVDPDAADEQEEQEGSSVTNSNRERSPMLNTISELEED
NDEDEDMYGIPDINFFGTPGEEVSNSQISPQVLTSASLNSLEDHSNENVGVADEERAVPA
GPKLLECAENDDFMTAFDKMLTENIQDRMREIVKPQQIDISVPLHVRGNLKKTYEQLMEP
EEDKSTVTFVLMVRKGNKQLYKNLDVPFDSQLAMNLKNREEAEREEKEKVKRLTLDINER
LEEEDYLEMIAQAQRPAVVNLNRERKQKYQHPKGAPDADLIFGPKKATRLDAL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcaaaaatctgatggcatgggtttaaagaaaaaccgcaatttgaaaaaagaa
actgagagtacctctacacctattcagtctagtttaggagatggagatgaacaggaacca
ggagttggggggaccaccaacagtgaccaccaaaatggttatggttcgaatgtcaattgt
aaaacttcaattggatctgatgataaaaatgatgcattcatagcaaatggctccaaagag
gatatatctatgtcctgtgatcttagtgaggagtcggaggaaagacctgtggaggacaag
gctcttcttacggcttatatttatgatgcaacatcaagacttcaggagaaaactgctctt
cgccagaagaatcaacctggagcatttacaagaccagatgaaaagcatttaagaaactta
gactctagtctgaagaaaaatacagcatttgtgaggaaaatgaaaactttctctgcatca
caagcggattcattagtgaaggatatggctgccctaaacttgagtaaatacataagtgaa
attgctgctgcactggtcgagtcaaaactgaaaatgacagatattccagctgctgtttca
atatgctgcctactccatcggacgtacgctgaattttctggattcttgcttgaaaattgg
cacaaggctttggctgtgaaaaaagatgaacctatttcaaatcccagtaaacttagggtt
gacattcgattttatgctgatctagttaatgcaggaatattttccttcagggaaggctta
gctcttttagggagtgttttaactgctcttattcaaggagacaaagaggagcacaagaat
ataaatattatactaagtttttgtaaacattgtggtgaagattatgcagggctggtccct
aggagaatccgtcaattatcagaggaatataacatgcctctccccaagagtgacttgtta
tcacctgagaaaacaaagaatgtccgacagcttctgaaggactactatgcgtccttgtgc
cggcatcttattaaggagcataatgaattacaagcatttgaaagacaaaataagaggata
cttcaaacaaaaggagaattaagtggtgaacgaagagaaaggttggacacattgcaatct
tcatttgaaaagctgcttacaaacaccattagctttgcggacatcttagatgaagacatt
cctgaactatctctgtcagagcctttgaagcacgacgatgaggcagcacttaaagctgga
gctgaggttgaagaattccctgttggcatggctttgtgggatgatgaggagtcaaagaaa
ttttatgaaagtattccagatttgaggtctatccttccaggattatttcctaaagattca
acaccaactgccgaaccaaaggaaactgagtgtgaacctgatacaaaacagagtgaagaa
atcaaatcagtcgattcgagtgaagccttaataactttcaactcaggtagtccagtcgaa
gaattggatgagcatgatagtgcggcaaatggcagtgcaaaagttgtgatggattcattt
ctcacccaccttttgaattgcataaatgtggaaaaaattgacaatgcagctgttgagttt
ggcttgaatctgaatacgaaatacaaccgtaggaaactagtaaaggccttatttgcagtc
cctcgcacacgttttgatttactcccatattatgctcgcatggtggccatattaaatcca
tgtatgcctgacattgcttcagaactcaactttatgcttttgcaagatttcaaataccat
gtgaagaagaaggaccagataaatattgaatccaaagttaaagttatacgattcatcgga
gaacttgtgaatttcagtgtattatctaaagttgatgcattgcactgtctgaaagttctt
ttgcaagattttacacaccattttattgagatggcatgtaacctattagagacatgtgga
aggtttttgtatagaagtcaagattcccatcaacgaactaagatatatttggaacaaatg
atgaggaaaaaggctgtattgacattggaatctaggtatgtcacaatgatcgagaatgcg
tactatcatattttaccacctgaagttagtgtcacgcagaagaagaaggagaagcctgtc
aaattagcatacattgacaagttgttatatcaagatttagcaaaaccaactacggacaaa
gttctgcgccaaatgagaaagctgaactgggatgacaatgaagtctccttgtatgcaatt
aagtgtctgacgcagatttggaaatataagtatttcaacattcgatgcgtggcaaacatg
gtgtccggacttgttggtcatttggaaggcattggtgtccaagttgtggatgctgtatta
gaagacattcggatgtgtatggaaattgggcatccgaaatataaccaaagacgcatagct
atgattatgtacttgggtgagctctataattatcgaatggttgagagtggagatattttc
aaggttctatattccctgataacatttggtgttggtcgagatcaccagaccccatctcct
ttggatccgccggagaatttattcagaataagacttgtctgtgttcttctagaaacctgt
ggcacttatttcagccatgggtcaagtaaaaagaagttggattgcttctttgtgtatttt
cagaactatttctggtataaatattctcatccattttggaatgtaaacaacccctttcca
tttggggttatgtttatgttcaaggatgttctcacatctttgaggccaaaaattaaactt
tatgaatcttatggagaagcacaatatgagcttatggcactggaatctgatctccggtta
agattaacagaagtagctccagagttgattagtcaagatgagttagatgatgctgttcac
acagatgcagtggacccagatgctgctgatgagcaagaagaacaagaaggaagttctgtt
accaacagtaatagggaacgatctccaatgctcaacacaatatcagaattggaggaagat
aatgatgaggatgaagacatgtatgggatacctgatataaatttctttggcacaccaggt
gaagaggtttctaattctcagatcagtccacaggtgctgacatctgcatccctgaacagt
ctagaagaccatagtaatgagaatgttggcgttgctgatgaagagcgggctgtgcctgct
gggccaaagttattagagtgtgcagagaatgatgacttcatgacagcctttgacaaaatg
ctgacagaaaatattcaggacagaatgagggaaattgtcaaacctcagcaaatagacatt
tctgtcccacttcacgtgagaggcaacttgaagaaaacttatgagcaattaatggagcca
gaagaagacaaatccacggtcacctttgtcttgatggtccggaaaggaaataaacaactt
tacaaaaacctagatgttccttttgactcacagctagctatgaatcttaagaatagagaa
gaggctgaacgagaggagaaagaaaaggttaagcggttgactcttgatattaatgaaaga
ctcgaagaagaggactaccttgaaatgatagctcaggctcagcgtcccgcagtggtgaat
ttaaaccgtgaacggaagcagaagtatcagcatcccaagggggctccagatgctgatctt
atatttggtcccaagaaagctacaaggttggatgccttatga
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