Ischnura elegans (blue-tailed damselfly): 124170902
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Entry
124170902 CDS
T09104
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
KO
K19719
collagen type II alpha
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel04512
ECM-receptor interaction
iel04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124170902
04518 Integrin signaling
124170902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
iel00536
]
124170902
Glycosaminoglycan binding proteins [BR:
iel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124170902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
TILa
Motif
Other DBs
NCBI-GeneID:
124170902
NCBI-ProteinID:
XP_046405908
LinkDB
All DBs
Position
1:complement(138818989..138903408)
Genome browser
AA seq
1614 aa
AA seq
DB search
MGSARFVLLALLVLSPGLLEAARPRVPQGKAAQQRLHNKRQAEGDSPGYTDYEYGEYYEE
YEDPVQAGVEGAAPGGQPPPPTSAAVPAPAQPEVDEDEDEDEEEEEEEAVTTTTTTPAPP
IRRLSPGTPVDSTGFENVARWRCTFDGVNHEDGETWNPDACTVCSCSLGRVQCHTVQGCT
GNNCADVTCEAVDCQTQTYIPLGQCCPVCAEDKVQPESVPVQPAKKPKPSKPVVSSAEES
TGSNAVAYPGPRGDPGYPGERGRPGEAGNPGSPGIPGIPGPPGPPGPGPDVNSYIQQLAH
ISGSSGGGDKGPTGGGGGGGGYPDPFQYLQAQVGPVGPRGPPGPPGPSGPQGFQGVRGEP
GDPGPPGLPGPVGPRGIAGLPGKDGEAGEDGEAGQPGTSGPPGPRGLPGMPGLPGIKGHR
GFPGIDGAKGEQGPGGEKGSPGPSGPMGPVGPMGPSGPRGERGREGPPGPHGLRGIDGIA
GPPGPPGAIGKPGPPGFPGGPGNKGDQGATGPKGSSGLQGPRGESGRPGQSGESGPQGPP
GKDGIPGEKGSPGAAGVSGPPGFPGGRGPPGLSGGPGPSGPKGSPGLPGERGFKGEAGTK
GEAGAIGPRGLPGTAGAAGKRGKRGVRGPTGPAGPAGERGAPGGRGLPGPDGAAGPKGQA
GDRGPAGPQGTKGASGDPGRPGPPGLQGLRGQQGRPGSPGKSGNPGERGQPGADGKPGEQ
GPPGIQGLPGPIGLQGEKGFPGESGKDGEQGPQGVPGPRGDHGKEGAVGPQGAAGPPGSN
GERGPPGQPGPRGFQGLPGAPGNPGSPGKDGEVGLPGPAGLVGQTGPRGERGFPGERGPI
GVPGPPGQRGETGNSGSDGLPGPAGVKGDKGHSGPSGLVGLPGIRGQPGPAGEKGERGSS
GSTGPEGPPGRAGERGPQGPVGAQGPPGEPAERGDPGPPGQPGEAGASGSPGERGLTGPP
GIQGFPGLPGAAGFPGAKGERGLTGSKGEQGSPGQSGSPGDTGPPGLTGLTGSKGARGEP
GPRGDSGLMGPVGRPGESGPPGLPGSQGPQGPSGFPGIKGSPGDSGRPGAPGPPGQPGAP
GPEGSKGDAGSMGPSGPSGQPGPQGPAGDRGLPGLPGPSGPSGLRGIRGAQGETGPPGKP
GSEGPPGPSGMVGPPGQPGHVGEPGPEGPSGKSGPPGISGRPGDKGPIGTPGPLGPPGTP
GPPGLPGSAGPPGSTGERGLRGEAGPQGVEGQQGARGKPGPAGPEGTKGDKGETGLQGAK
GHRGLIGLQGLPGAPGLPGEKGMTGPQGPPGKDGEPGSRGSPGRDGNPGQVGLTGPPGPR
GPPGEEGRSGHPGPPGQPGPPGPPGDTLGYDAAAIAALLGQGQGQSKGPDPLVGDEPIRI
FGKELSESERQEVVLKAYEHLKSTFERFRKPDGQKRSPAKTCRDLATAHPELANGEYWID
PNDGDNRDAILVYCDMSTHSTCVYAQPEQSEEITYVGDELELWLGDMEGGMKLTYKADSN
QIGFLQLMSSSATQNITYHCKNSVGYFDSIKRSYRKGLKLLAWNDAEITPRGNQRFRYEV
LEDECRFKRPEWAKTVIRYSTDKASRLPVVDVAVRDIGEEGQSFRVEVGPVCFT
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgcccgatttgtgcttcttgccctcttggtgctcagcccggggctgctggaa
gcggctcggccgagggtcccccagggcaaggcggcgcagcagaggctccacaacaagcga
caggcggagggtgactcccccggatacacggattatgagtatggagagtattacgaggag
tacgaggacccagtgcaagcgggagttgaaggggcagctccaggtggacagccaccccca
ccaacttcagcggcagttcctgctccagctcaaccggaggtagatgaggatgaagatgaa
gacgaggaggaagaagaagaggaggctgttactacgacaaccaccactcctgctccacca
atacgcaggctttctccaggcactccagtggactcaacaggttttgagaatgtggcccga
tggcgctgtacctttgatggcgtcaaccatgaagatggtgaaacttggaaccctgatgca
tgcacagtttgcagttgctcccttggccgtgtccagtgccatacagtgcaaggctgtaca
ggaaacaactgtgcagatgtaacttgtgaagctgttgattgccagactcaaacatacatt
ccattgggtcagtgctgtcctgtatgtgcagaagataaagttcagccagaatctgtgcct
gtacaaccagcaaaaaaaccaaaaccatcaaagcctgttgtgagtagtgcagaagaaagt
actggttcaaatgctgtagcctaccctggtcctcggggagacccaggctatcctggagag
cgaggacgtccaggagaggctggaaatcctggttccccgggtatacctggcatcccaggg
ccacctggacctcctgggcctggacctgacgttaacagctacatccaacagctagctcat
attagcggtagtagtggtggtggtgacaaggggccaactggtggtggtggtggtggtgga
ggatatcctgatccttttcagtacttacaggctcaagtaggccccgtgggcccacgagga
cctccagggcctcctggaccatctggacctcagggatttcagggagtcagaggggaaccg
ggtgaccctggcccacccggcctacctggccctgttggaccccgtggaattgctggactt
ccaggaaaagatggtgaagcaggagaggatggtgaagctggacagcctggaacatctggg
ccgcctggtcctcgtggactcccaggaatgcctggcttacctggcatcaaaggccaccga
ggctttccaggcatagatggagcaaaaggagagcaaggtcctggaggagagaaagggtct
ccaggcccatctggaccaatgggacctgttggacccatggggccatcgggtccacgagga
gaaagagggagggagggacctccagggcctcatggtcttcgtgggatagatggaatagct
ggacctccaggaccaccaggtgcaatagggaagccaggacctcctggatttccaggagga
ccaggaaataaaggtgaccaaggagcaactggacccaaaggcagctccggacttcaaggt
ccaagaggtgagtctggaagaccaggacaatctggagagtctggaccccaaggacctcct
ggaaaagatggaattcctggagagaagggtagtcctggagctgctggagtttccggaccc
cctggcttccctggaggcaggggtccacctggcttatctggtggccctgggccatctggc
cccaaaggaagtcctggtcttccgggagaacgtgggttcaagggagaggcagggaccaag
ggagaggctggtgcaataggccctcggggtcttcctggaacagccggagctgcaggcaag
cggggcaaaagaggggttaggggccccactggtcccgctgggcctgctggtgagaggggt
gctccaggtggacgagggctcccaggtcctgatggagcagcaggacccaaaggccaggca
ggagatcgaggtccagcaggtccacagggcaccaagggtgcctcaggagatccaggaagg
ccagggccacccggtcttcagggactgcgaggtcaacaaggaagaccaggttcgccagga
aagagtggtaaccctggtgagaggggccagccaggggctgatgggaagccaggagagcag
ggaccaccaggtattcaagggcttccaggaccaattggacttcaaggagaaaagggcttt
ccgggtgaatctggcaaagatggtgaacaaggtccccaaggtgtaccgggtccaagagga
gatcatggcaaggagggcgcagttggtcctcagggtgctgctggaccaccgggctcgaat
ggggagagggggcctcctgggcagccgggtcccagaggttttcagggtcttcctggtgca
ccaggaaatcctggatctcctggaaaggatggtgaagttggccttccgggtccagctggg
ttggtggggcaaacagggccacgtggtgagaggggattccctggtgagagagggcccatt
ggagtccctggcccaccaggacagaggggtgaaactggaaactctggttctgacggactt
cctggcccggctggagtgaaaggagacaaaggtcattctggtccatctggtttggtgggt
cttcctggaattcgagggcaacctggtcctgctggagagaagggagaacgtgggtcatct
ggatcaaccggtcctgagggaccaccaggaagggctggagaaagaggacctcagggtcca
gtaggtgctcagggtccacctggagagccagctgagaggggagatcctggtcctcctggt
caacctggggaggcaggagcttcgggaagccctggagagagaggattaactggacctcct
ggaatacaaggatttccaggcctccctggagcagctggatttcctggtgccaaaggagag
agggggttgactggaagcaaaggagagcaaggaagtccaggacaatcaggaagccctggt
gatacgggacctccaggattgactggactcactggttctaaaggagctcggggtgaacca
ggaccacgaggagatagtggactaatgggaccagttggaaggcctggtgaatctgggcca
cctggtcttcctggatctcaaggacctcagggaccgtctggttttcctggcataaaaggg
tctccgggtgactctggacggccaggagcgcccggtccccctggacagcctggtgcccct
gggccggaaggatccaaaggtgatgctggctcaatgggaccctctggaccatcaggacag
ccaggacctcaagggccagcaggtgatcgtggtcttcctggactccctggtccatctgga
ccttctggactcagaggcattcgtggagctcagggtgaaactggacctccaggcaagcct
ggatcagagggtcctccaggcccttctggaatggtaggacctcctggtcaacctggtcat
gttggtgagcctggaccagaaggaccatcgggaaaatcaggtccaccaggaatttctggc
cgtcctggtgacaagggcccgattggaacaccagggccattaggacctcctggaacacct
ggaccccctggattgcctggttcagctggaccccctggctctactggagaaagaggtttg
agaggagaggctggtcctcaaggtgtggaaggacagcagggtgcacgaggaaaacctgga
cctgctggaccagaaggtactaaaggtgacaagggagaaactggattgcaaggtgccaag
ggtcacagaggtctcattggactgcagggattgcctggtgcaccggggctcccaggagag
aaaggaatgacaggacctcaaggaccacctggaaaagatggagagccaggctcaagagga
tcacctggtcgagatggaaaccctggacaagtgggattgacaggacctccaggtcctcgt
ggaccacctggagaggaaggtcgcagtggtcatcctggacctcctgggcaaccaggacct
ccaggtcccccaggagatactcttggttatgatgctgccgccatagctgccttattagga
caaggtcaaggccaaagcaagggaccagatccattggttggagatgagccaataagaata
tttggaaaggaattgagtgagtctgaaagacaagaggttgttttgaaagcctatgaacat
ctcaagtctacatttgaacgcttcaggaagcctgatggacaaaaaagatcaccagcaaaa
acatgtcgagatcttgccactgctcatccagaattagcgaatggtgaatactggattgat
cctaatgatggagacaaccgtgatgcaattcttgtctactgtgatatgagtactcactca
acatgtgtctatgcccagccggagcagtccgaagagattacttatgttggggatgaattg
gaattgtggttgggagacatggaaggtggaatgaagttgacttacaaagcagacagcaac
caaattggattccttcaactcatgtccagtagtgccactcagaatattacataccattgc
aaaaattctgttggttactttgattcaatcaagagaagttacagaaaaggtctgaagctc
cttgcatggaatgatgcagaaattacacccagagggaatcagcgcttccgatatgaagtt
ttagaagatgaatgtaggttcaagcgtcctgaatgggccaaaacagtcattcgatattca
acagacaaagcctcacgtctacctgtagtggatgttgctgtacgagacataggtgaagaa
ggacagagtttccgtgttgaagtaggaccagtgtgttttacgtga
DBGET
integrated database retrieval system
