Ischnura elegans (blue-tailed damselfly): 124171643
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Entry
124171643 CDS
T09104
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124171643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124171643
Enzymes [BR:
iel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
124171643
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124171643
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124171643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_14
LRR_8
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
LRR_9
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
124171643
NCBI-ProteinID:
XP_046406811
LinkDB
All DBs
Position
X:113830977..114159344
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AA seq
562 aa
AA seq
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MSRNSVKDKAENHNRRVHSIMNQDDIASGKRSNWSELEISGTIRNLSPELWKLQHLTVLY
LNNNCLSRIPADIGKLHNLQHLDLSNNKLRSLPSELGDLICLRELQLNNNVLRVLPYEIG
KLFQLQILGLKGNPLTKEILNLYGDGMGTSKLLAYMLDNLTVTTAHPPQRPWIPLTRPNR
SKPACIFTVMCYNILCDKFATRQMYGYCPGWALQWDYRKKGILNEIRHYAADIISLQEVE
TDQFHNFFLPELKADGYDGIFSPKSRAKTMAENERKYVDGCAIFYRHAKFTLEKEYLVEF
NQLAMAQAEGSDDMLNRVMPKDNIGLAALLRTNDIAWENGLPMDSSGQIVPQRILVCTAH
IHWDPEYCDVKLIQTMMLSHELRVILDEIAGSESSLSYRMTLQSNPHKGARQDAVHLLLC
GDFNSLPDSGVVEFLTTGRVSADHPDFKELLGYKSCLKKISPCDRPNEYTHSFKLASAYS
ADVMAFTNFTYDFKGIIDYIFYPRMTMTPLGLLGPLAHDWFRDNKVVGCPHPHVPSDHFP
LLVELEMTASVSPNMNGLIVRR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaacagcgtcaaagataaggctgaaaaccataacagaagggttcactctatt
atgaaccaggatgatatagcatcaggaaagagatcaaattggtcggaacttgaaatatcg
ggaactattcgaaatttgagccctgaactatggaaacttcaacatttgactgtcctctat
ctgaacaacaactgcttgtcacgtatccctgctgacattggcaagcttcataacctgcag
catttggacctctcaaacaacaaactgcgaagtttgccgtcggaattaggagatctaatc
tgtctcagggagcttcaattaaataacaacgttctacgagttcttccttatgaaatcggc
aaattgttccagctgcaaatattaggccttaaaggaaaccccttaactaaagaaatcctg
aatctctacggagatggaatgggaacttcgaaattgctggcatatatgcttgataacttg
acagtgacaacagctcaccctcctcaacggccgtggattccactaacccgtccaaataga
tccaaaccagcatgcatcttcactgtaatgtgctacaatattctgtgtgacaaatttgca
actaggcaaatgtatgggtactgccctggatgggcccttcagtgggactatcgaaagaaa
gggatcctcaatgaaatccgccactatgctgctgatatcattagcttacaggaggttgaa
acagaccagttccacaacttctttttacctgagctgaaagctgatggatatgatggcata
ttctctccaaaatctcgggccaaaacaatggctgaaaatgaaaggaaatatgtggatggt
tgtgcaatattctatcgacatgcaaagtttactctggagaaggaatacctagttgagttc
aaccagcttgcaatggcccaagctgaaggttcagatgatatgctgaaccgggttatgcca
aaggataacattggccttgctgctctcctgcgtaccaatgatattgcttgggaaaatgga
ctacccatggactcctcaggacaaattgtaccgcaacgaatactggtgtgcacagcccac
attcactgggatccagaatattgtgatgttaaactaatacaaacaatgatgttatcacat
gaactgcgagttatcttggatgagattgctggaagtgagtcatctcttagttatcgaatg
acgctgcagtcaaacccgcataaaggagcaaggcaggatgctgttcacctcctgctgtgt
ggagactttaattctttacctgattcaggtgtcgtagagttccttaccacaggacgagtg
tcagctgaccatccagattttaaggagttgcttgggtataagtcttgcctgaagaaaatc
tcaccatgtgaccggccaaatgagtatactcactcctttaaattagcctcagcatatagt
gctgatgtcatggcattcaccaatttcacatatgatttcaaaggcattattgattacatc
ttttacccacgtatgaccatgactcccctgggactccttggccccctggctcatgactgg
ttccgggacaacaaagttgtgggctgccctcaccctcacgtaccttctgatcatttccct
ctcctggttgaactggagatgacagcttcagtgtcaccaaacatgaatgggcttatagtc
cgcagatag
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