Iodobacter fluviatilis: C1H71_04035
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Entry
C1H71_04035 CDS
T06803
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ifl
Iodobacter fluviatilis
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifl03016
]
C1H71_04035
Enzymes [BR:
ifl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C1H71_04035
Transfer RNA biogenesis [BR:
ifl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C1H71_04035
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QBC45637
UniProt:
A0A7G3GDQ8
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Position
complement(919439..921286)
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AA seq
615 aa
AA seq
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MNVFFEEDGNFKVATIKEEQAASLMLEDTRGKRFKVKAANVLLRFERISLDDFLKAAQVA
ADEIDIDFLWECCGVEEFAFNDIAAEYFGANPSVQQQAAALIRLHAAPMYFYRKGRGHYK
AAPEENLKAALAGVEKKKKEAEQMAIWQAELQAGALPESFIPLASKLLHRPDKNTIEWKT
LAAAADAMQTSTLRLMEKIGAIPDVADYLLDGFLAESFPKGRGFAPTEPVTCPSDLPLAD
VRAFSIDDSTTTEIDDAFSLKRLPNGNWQVGIHIAAPALGIVAGSDVDKIILDRLSTVYM
PGDKITMLPNEVVEVFTLQEGRTCPALSMYLELSQGFDVLSHRSIVEMVPIAANLRHEQL
EPVFNENTAGKADAPDFPWKEEITFLWHFAGALEGRRGKADPTAPLKIDYSFYIDQVDGE
KRVRIVPRKRGAPMDKLVAELMILANSTWGKDLMQGQVAGIYRGQNGGRVRLTTQAGPHI
GLGVECYSWASSPLRRAVDYVNQLQLLALLGNTKPRFQKNDAELYSIIGSFDTAYAAYAE
LQDKMERYWCLRWLQQEKKREMTAVVIKENLVRVDGMPLVIRAGIPELPAGTTVSLQLMK
IDLLELLLETRMATI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttttttgaggaagatggtaatttcaaggtagccacgatcaaggaagagcag
gctgctagcctgatgcttgaagatacccgtggtaaacgttttaaagtgaaggcggcgaat
gtgctgctgcgctttgagcggattagcttggatgactttctaaaagcggctcaggtcgcc
gcagatgaaattgatatcgattttctgtgggaatgttgtggtgtggaagagtttgcgttt
aatgatattgccgcagaatactttggtgctaacccatcggtgcagcagcaagcggcagcg
ttgattcgtttacacgcagcgcctatgtatttttaccgtaaggggcgtggccattataag
gctgcccctgaagaaaatctaaaggccgccttggccggggtcgaaaaaaagaaaaaagaa
gccgagcaaatggccatttggcaagccgagctgcaagctggcgctttgcccgagtcattt
attcctttggcgagcaaattactgcatcgcccagataaaaacaccattgaatggaaaaca
ctggctgccgctgcggacgctatgcaaacgtctaccttgcgtttgatggaaaaaattggc
gcgattcctgatgtggccgattatctactcgatggtttcctcgctgaatccttccctaag
ggccgtggttttgccccaaccgagccggtgacttgccctagcgatttaccgctggccgat
gtgcgtgcctttagtattgatgactctaccaccacagaaattgacgatgctttcagtctg
aagcgtctgcctaatggcaattggcaggtgggtatccatattgccgcgcctgctttgggg
attgtggcgggctcggatgtcgataaaattattctggatcgcctgtctaccgtgtatatg
ccaggcgataaaatcactatgttgcccaacgaagtggttgaggtgtttaccctgcaagaa
gggagaacctgccccgcgctaagcatgtatttagagttgtctcagggctttgatgtgctt
tcacatcgcagtatcgtagagatggtgccgattgctgccaacttacgtcatgaacagctt
gagccagtgtttaatgaaaacaccgcaggtaaagcggatgcgcccgatttcccttggaaa
gaagaaatcaccttcttatggcactttgccggtgcattagaaggccgccgtggtaaagct
gacccgactgcaccgctaaagatcgattacagtttttacattgatcaggtagacggcgaa
aaacgtgtgcggattgtgccgcgtaaacgtggcgcaccgatggataagctggtggccgag
ctgatgattctggccaatagtacttggggcaaggatttgatgcagggccaagtagcgggt
atttatcgcggtcaaaatggtgggcgtgtgcgcctcaccacgcaggcgggcccgcatatt
gggctgggtgtggagtgctactcttgggcgtcttcccctttacgccgcgctgtggattac
gtgaatcagctgcaacttttggctttgctgggcaataccaagccgcgtttccaaaagaac
gacgccgagttgtattcgattatcgggagttttgacactgcttatgcagcttacgccgaa
ttacaagataagatggaacgatactggtgtttgcgttggttgcagcaagagaaaaaacgc
gaaatgactgccgtggtcataaaagaaaacttggtgcgggtagatggcatgcctttagtg
attcgagcaggtataccggaactaccagcgggcacaacggtcagtctacaattgatgaaa
attgatttattagaactgctacttgaaacgcgtatggcaacgatttaa
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