Iodobacter fluviatilis: C1H71_04640
Help
Entry
C1H71_04640 CDS
T06803
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1H71_04640 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifl03400
]
C1H71_04640 (recC)
Enzymes [BR:
ifl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C1H71_04640 (recC)
DNA repair and recombination proteins [BR:
ifl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1H71_04640 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBC42906
UniProt:
A0A7G3G6K5
LinkDB
All DBs
Position
1043619..1046948
Genome browser
AA seq
1109 aa
AA seq
DB search
MLHLFQSNRIDVLLAALAHQLETSPLASPFEQEKIVVQSKGMGRWLNFRLAEKQGMTAQM
GYPLLASFFWDLMQRTLGGNLPKKSPFSREIMGWRVLAWLDSQPNAPVLLNYLREGGDFR
RFELATRIADVFDQYLVYRADWLLAWEKNQSLGLGDDEAWQAALWRYLSKDELDIRVDGG
HRGALLAATHKRLLDPRPLDLPSRVSLFGISSLPPVYMEILRALSKRCEVFIHALNPCSI
PWGEIRDQAEIARLSDGYDPDDLYLEVGNPLLAVWGKQGREFFNQLIAEPEMMEYFTPFP
GNHETLLQTLKSDVLELVARSPETAQRVALDDKSLQIHVCHSAMREVEVLHDQLLALFER
DASLSPADIVVLMPDIEHYIPYIEAVFGRTGIDPRPKANQTPHVPFAIADRSLRDSAPLA
QALLELLILPQCRFASDWMMALLDIPAIARRFEIPVSELPTIHRWMNELGIHWGRDGEHK
AELGLPPTFEHTWRFGLDRLLLSIALPAGVAHHAAPLFAGTLPGSGVAGNQAQLAASLAA
FAETLFAQAQALSGDHTPAEWHIKLIALIEALFAPDETDEKEALLLAELREQVIEFALQS
QEAGYDAPVDLSVPRSWLNGALSGKIPSGGFLTGAVTFCAMVPMRCLPFRVIALLGFNDG
AFPRESRPPGFDLMAHNPQYGDRSRRADDRYLFLETLLSASDVLYLSYVGRGIQDNNRIP
PSVVVSDLIDAVSKSFVLEDAAPMPALGNEALKWRRLERERLLAHLIIEHPLQPFSPRYF
KDQRLVAYSPLWFIAASQLGQPQSAPLSVLSETLPLPEMEPIAFVDFLAFWRNPTRYLLR
NRLGIRLATEAVEFEGNEPFSLSFSAKSELNSVIWQSLEQGWSADAIATGRAAGLLPHGG
FGNISAAKQSASMIKLYNTAEPLLHDVPLAPYSFRFELSGQILTGALHQLRPNGQVMIWT
DHSSPIELIACWLKHLALCLASPEGVALETRIVSQKGHWRFAPLTKPEASHQLEKWLQYY
WQGQAERLPFATRSSAKYAEALYTDDDKTKADTAARESWHGNSLRGFSGEESEPWYEMAW
RGQSLLSDEGFAEMANTLLLTMYQCREEL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcatctattccaatccaaccgtatcgatgttctgctggcggcgctggcgcatcag
ttagagacttctcctttggcttcccctttcgagcaggaaaagattgtggtgcagtctaag
gggatggggaggtggttgaattttcgcttggcagaaaagcaagggatgacggcgcagatg
ggctatccgctgttggcgtcttttttctgggatttaatgcagcgcacgctaggtggcaat
ctgccgaaaaagtcgccgttttcgcgggagattatggggtggcgggtgttggcttggctg
gattcgcagcccaatgcgccggtgctgcttaattatctgcgcgaaggcggggattttcgg
cgctttgaactcgccacgcggattgccgatgtgttcgatcagtatctggtttaccgcgcc
gattggctgctggcttgggaaaaaaatcagagcctagggctgggggacgatgaggcttgg
caggcggcgctgtggcgctatttatctaaagacgagctggatattcgtgtggatggcggc
catcgcggcgctttgctggcagccacccacaagcggctgctcgacccgcgcccgctggat
ttgcccagccgtgtttcgctatttggcatatccagcctgccgccggtgtatatggagatt
ttgcgcgcgctatccaagcgctgcgaggtgtttatccatgcgcttaatccttgcagtatt
ccatggggtgagattcgggatcaggccgagatagcgcggctctctgatggctatgacccg
gatgatttatatctggaagtgggtaatccgctgttggcggtgtggggtaagcagggacgg
gagttttttaaccagctgattgccgagccagaaatgatggaatatttcacgccctttccc
ggcaaccatgaaacgctactgcaaacactgaaaagcgatgtactggaattggtcgcccgc
tcaccagaaaccgcacaaagggtagcgctagacgataaatcgctgcaaatccacgtttgc
cattcagccatgcgcgaagtagaagtactgcatgatcagctactggctttatttgaacgg
gacgccagcttaagccctgccgatattgtggttttgatgccggatatcgaacattacatc
ccctatattgaggcggtcttcggccgcacggggatagatccgcgccccaaggccaatcaa
accccgcacgtcccctttgccattgccgatcgcagcctgcgggattccgcccccttagct
caagccctgttagagctactcatactgccgcaatgccgttttgccagcgattggatgatg
gcactactggatattcccgccattgcccgccgctttgaaatccccgtcagcgagctgcct
acaattcatcgctggatgaatgagctgggcattcattggggcagagacggcgagcataag
gccgagctaggcctgccacctacctttgagcacacttggcgctttgggctggataggctg
ttgctaagcattgctctacccgctggcgtggcccaccatgctgcgccgctgtttgccgga
accctgccgggcagcggtgtggcgggtaatcaagcgcagctagcggcaagcttagccgcc
tttgctgaaacgctgtttgcccaagcccaggccctatcaggggatcacaccccagcagag
tggcatatcaagctgattgctctgattgaggccctgtttgcgccggacgagaccgatgaa
aaagaagcactcttgctagccgagctgcgcgagcaagtgatcgaatttgccctgcaaagc
caagaggctggctacgatgcaccagtggatttatccgtgccgcgcagctggctcaatggt
gcgctgtccggcaagattcctagcggtggatttttaaccggcgcggtgacgttttgcgct
atggtgccgatgcgctgcctcccctttagagtgattgccttgctaggttttaatgacggc
gcttttccgcgtgaatcgcgcccaccgggctttgatttgatggcgcacaacccgcagtac
ggcgatcgctcacgccgtgccgatgatcgctatctatttttagaaacgctgctttcagcc
agcgatgtgctgtatctgagctatgtagggcgcggcatccaggacaacaatcggatccca
ccatcggtagtggtatccgatttaattgatgcagtcagtaaaagctttgtgctggaagac
gcagcccccatgcctgcgctgggcaatgaggcgctgaaatggcggcgcttagagcgggaa
cgcctgctcgcgcatctgattatcgaacatcccttgcagccctttagcccgcgctatttt
aaagaccagcggctggtagcctattcgccactgtggtttatcgccgcctcgcaactgggc
cagccacaaagcgcgcctttatcggtgctaagcgagaccttgccgctacccgagatggag
ccgattgcctttgtagatttcctcgctttttggcgtaacccaacccgctatttactcaga
aatcgcctcggtattcgcttggcaacagaggccgtcgagtttgaaggcaatgagccattt
agcctttctttctctgccaaaagcgaactaaacagtgtgatttggcaatccttagagcag
ggctggagtgcggatgccattgccactggccgcgctgctggcctactgccacacggcggt
tttggcaatatcagcgccgccaaacaatctgccagcatgattaagctgtacaacaccgcc
gagccactgcttcatgatgtgccgcttgcgccgtactctttccgctttgagttgtcaggg
cagattttgactggtgccttgcatcagttacgccctaatggccaagtgatgatctggacc
gatcacagctcaccgattgagctgatcgcctgctggctaaagcacctggcactctgtctt
gccagcccagaaggcgtggcgcttgaaacccgcatcgtcagtcaaaaaggtcattggcgt
tttgccccgctcaccaagccagaagccagccaccaactagaaaaatggctgcaatattac
tggcagggccaagctgagcgcctgccctttgccacccgcagcagtgccaaatatgccgaa
gcgctttatacagacgatgacaaaaccaaggcagataccgcggccagagaatcttggcac
ggtaacagcctgcgtggctttagcggggaagaaagcgagccgtggtatgaaatggcttgg
cgtgggcaaagcttgctgagcgatgagggatttgccgagatggcgaatacgctgttgcta
acgatgtatcaatgcagggaagaactataa
DBGET
integrated database retrieval system
