Iodobacter fluviatilis: C1H71_04810
Help
Entry
C1H71_04810 CDS
T06803
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1H71_04810 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifl03400
]
C1H71_04810 (recB)
Enzymes [BR:
ifl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C1H71_04810 (recB)
DNA repair and recombination proteins [BR:
ifl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1H71_04810 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBC42939
UniProt:
A0A7G3G6X5
LinkDB
All DBs
Position
1096952..1100563
Genome browser
AA seq
1203 aa
AA seq
DB search
MNLRPLNLFDMPLAGPHMIEASAGTGKTWTITGLYTRLVIEHGLRVPEILVVTFTEAATA
ELRDRIRGRLAEVLESFEGDEALDPFCQTLLDQHRERRPEIIRRLQRAIASLDEAAIHTI
HAFCQRVLVQSAFESGADFGMEILSDIGPVLDEIAADFWREQVYPADSAYTEYLLKSKAS
PEEWLRVVYGYLGQPLLHTVALPPLPDSHALAAALPHTLTRYQQLWLENAASIRPMLLEM
SAKKELKQTSYKPEQLEKVFLLIDDHIASNGGWQDIDSKELGKLSSSKLASGTAKTGTPP
SHAFFDAVEELAGLISDLSGICQLKEKHALAELRRRCDSELPERLARRQQLSFNDLLLRV
WQGLQDGDRLTTAIRRRYKAALIDEFQDTDGIQYDIFSHVFSDGNTPLFLVGDPKQAIYS
FRGADIHAYHQAEKLVEAKESLDTNQRSVPHLVTAVNTLFLRPKEAFVDPHVSFTAVHAA
SKARPELHIAGEDGISAPFRFQLLPEPEQVSEKGVQISWSKEAANSLAAQITAAEIEKLL
SGVARMSGAGVDKAISGGDIAVLVPDRFRAKTMQDALSARGIASVLRVRDSVWESQEARD
LYSVLAAIAEPANQGLLRAALISTLLGSNAADLLRLEISGWDNISDAFAHWKKTWQAQGF
IPMFREWLEYQGLDGRNVAQRLLSLVDGERRLTNLLQLAELLQAHKATGLEQHLAWFSRQ
SRNAGDEALLRLESDEDRVRIVTLHASKGLEYPIVFCPFLWDGRLLGRQSKSVRFHADKQ
AWLDLGSEDLDQHKALGQREAFEEKLRLLYVGLTRARNRCYVVWGNVGLKDNRGYTISDG
LAQSALAWLLHPVKSETDDPLEAQKEQLKSYDHPTLLADISQLCIDQPAVFAIQDAPKGR
LGLKAEPSEPLLFKPYHGKTLYPTWRVASFSGLTSSQRHHATEGPDHDSQSSAPEISTER
SIFSFPEREAAATVAGTCLHAILEEWDWQNIDALNLEVSRQLERHGIPSHWLEVVSQMVQ
NTVGAALDGNALRLRDIPASARVAEMEFTYAVGHCKSASLIAALQHYSLPTEFKQAAQQL
DFFHINGFLRGFIDLVFEYQGAYYVLDYKSNWLGNSIGDYHQLIPAMAQHHYYLQYLIYS
AAVRRFLHQRLPHFSDDQFGGVYYLFMRGMGEQNGQSGVYFNRPSMELLDQIEAALMGDR
VHK
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcgccctttaaacctatttgatatgccactggcaggcccgcatatgattgag
gctagcgcggggacgggtaaaacatggacgattacaggtttatatacaaggctagtgatt
gagcacggtttaagagtgccagagatcttggtggtgacctttaccgaggccgccaccgcc
gagctgcgcgatcggattcgtggccggctggcggaggtattggaatcgtttgagggggat
gaggcgcttgatcctttttgccaaacgctgcttgatcagcatagagagcgccgcccagaa
atcatccgccgcctgcaacgcgccattgccagcctagacgaggcggccatccataccatc
cacgctttttgccagcgggtgttggtgcaatcggcctttgaaagcggtgccgattttggt
atggagattctgagcgatattggccccgtgctagatgaaatcgccgccgatttttggcgc
gagcaggtttaccctgcggatagtgcttacaccgaatacctattaaaaagtaaggccagc
ccagaggaatggctacgggtggtatatggctatttaggccagccgctgctgcataccgta
gcgctgccgccattgccagatagccacgcactggccgccgcccttcctcatactcttacg
cgctaccaacagctttggctggaaaacgccgccagcatccgccccatgctgctcgagatg
tccgctaaaaaagagctcaagcaaaccagctataagccagaacagctagaaaaagtcttt
ttgctgattgatgaccatatcgccagcaatggcggctggcaggatatcgacagcaaggag
ttaggcaaattaagtagcagtaaactcgccagcggtacggcaaaaaccggcacgccgcca
agccatgcgttttttgatgcggtagaagagttggcgggcttaatcagcgatttaagcggc
atttgtcagcttaaagaaaaacatgccttggccgagctgcgccgccgctgcgatagcgag
ctgccagagcgcctagcccgccgccagcaactctccttcaatgatcttttgctgcgcgtc
tggcaaggtttgcaagatggcgatcgcttgactacggccatacgccgccgttataaggcc
gcgctgattgatgagtttcaagacactgatggcattcagtacgacattttttcccatgtg
tttagcgatggcaatactccgctatttttagtgggcgatcctaagcaagcgatttacagc
tttcgcggcgcggatattcacgcctatcaccaagccgaaaaactggttgaggccaaagaa
agcctagacaccaaccagcgctcggtgccccatttagtcacagcggtgaacacgcttttt
ttaagaccaaaggaagcctttgtcgatccacacgtcagctttacggcagtgcatgcggcc
agtaaagcaaggccagaattacatatcgctggagaagatgggatcagcgcgccgtttcgc
tttcagcttttacctgagccagagcaagtctcagaaaaaggcgtgcaaatcagctggagc
aaagaagccgccaatagcctagccgcccaaatcacggcggcagagattgaaaaactactc
agcggtgtggcaagaatgagcggcgcaggcgtggataaagccatctctggcggcgatatt
gccgtgctggtgccggatcgtttccgggctaaaaccatgcaagacgcgctcagtgcgcgg
ggcatcgccagcgtgctgcgggtaagggatagcgtttgggaatcgcaagaagcacgagat
ttatacagcgtgctggccgctatcgcggagcctgccaaccaaggcttgctgcgggctgcg
ctgatttctaccctgcttgggtctaatgctgcggacctgctgcggctggaaatcagtggc
tgggacaatatctcggatgcctttgcccattggaaaaaaacctggcaagcgcaggggttt
attccgatgtttagagagtggctggaataccaagggctggatgggcgaaatgtggcgcag
cggctcttatcgctcgtggatggcgagcggcggctaaccaatctattgcaattagccgag
ctattacaagcacacaaagccactggcctagagcaacacttagcttggtttagccgccaa
agccgcaatgcaggcgatgaagctttgctcaggctagaaagcgatgaagaccgcgtgcgc
atcgttaccctgcacgccagcaagggtctggaatatcccatcgtgttttgccccttttta
tgggatggccgcctgctgggccgccaaagtaaatcggtacgttttcatgccgataaacaa
gcgtggttagatttaggcagcgaagatttggatcagcacaaagcgcttggccagcgcgaa
gcctttgaagaaaaactccgcctgctgtatgtgggcctcacccgcgcaaggaatcgctgc
tatgtggtatggggcaatgtggggctaaaagataatcgcggctatacgattagcgatggt
ttggctcaatcggcgctggcatggttgctgcaccctgttaagagcgaaacggatgatcca
ctggaggctcaaaaagagcagcttaaaagctatgatcacccaaccctgctggcggatatc
agccagctctgcatcgatcagcccgccgtttttgccatacaagacgcgcccaagggccga
ttagggcttaaagccgagccgagcgagccgctgctatttaagccctatcacggtaaaacg
ctttatcccacatggcgagtcgccagcttttctggcttaacatctagtcagcgccatcat
gctacggaaggcccagatcacgatagccaaagcagcgcgcccgaaatcagcacagagcgc
tccatttttagctttccagagcgtgaagccgccgccaccgtggccggtacttgcctgcac
gccattttagaagagtgggattggcaaaatatcgacgctttaaatctagaagtcagcagg
caattagagcggcacggcataccgtcgcactggttagaagtggttagccaaatggtacaa
aacaccgtaggcgcagcgctagatggcaacgcgctacgcctacgcgacatccccgcatcg
gctcgcgtggccgaaatggaattcacttacgccgtaggccattgcaaaagcgccagcctg
atcgctgcgctacagcactacagcctacccacagaatttaaacaggccgcacagcagcta
gattttttccatatcaatggttttttaagaggctttatcgatttggtgttcgaataccaa
ggcgcttattacgttttggattacaaaagcaattggctaggcaattcaattggcgactat
caccaactcatccccgccatggcccagcaccactattacttgcaatacctgatctacagc
gcagccgtcaggcgctttttgcaccagcgcttgccccactttagcgacgatcaatttggc
ggcgtgtactacctatttatgcgtggcatgggggagcaaaacggccaaagcggcgtctac
ttcaaccgcccaagcatggagttattggatcagatagaagcggcgttgatgggggatagg
gttcataaataa
DBGET
integrated database retrieval system
