Iodobacter fluviatilis: C1H71_04880
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Entry
C1H71_04880 CDS
T06803
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C1H71_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifl03019
]
C1H71_04880
03009 Ribosome biogenesis [BR:
ifl03009
]
C1H71_04880
Messenger RNA biogenesis [BR:
ifl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C1H71_04880
Ribosome biogenesis [BR:
ifl03009
]
Eukaryotic type
Pre-60S particles
RNases
C1H71_04880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CTD1
UBC_like
Motif
Other DBs
NCBI-ProteinID:
QBC42950
UniProt:
A0A7G3G655
LinkDB
All DBs
Position
complement(1116594..1117148)
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AA seq
184 aa
AA seq
DB search
MPQDKNHLIWVDMEMTGLDPEKERVIEIAVIITDSNLNLIAEGPVFVVHQDASILDAMDD
WNKNTHGKSGLIEKVKASTLSEAEVEAQLIAFLEEYVPKGASPLCGNSVHQDRRFLVKYL
PTLEEFFHYRNLDVSTLKELCKRWQPEVAKQFKKRGAHTALADIQESIDELKFYREHFIR
QPAV
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagacaagaaccacctcatctgggttgatatggagatgactgggcttgatcca
gaaaaagagcgtgttattgaaattgccgtcattattacagacagcaatctcaacctgatt
gccgaggggcctgtgtttgttgtgcaccaagacgctagcattttggatgcgatggacgac
tggaataaaaatacccatggtaaatcgggcttaattgaaaaggtaaaagcatcgacctta
agcgaagcagaagtagaagcgcagctgattgcttttttagaagaatacgtgcctaagggc
gcatcgccgctgtgtggtaattcggtacaccaagatcgccgtttcctagtgaaatatcta
cccactttggaagaattttttcactaccgcaatttggatgtttcaaccctgaaagagcta
tgcaagcgttggcaaccagaagtcgctaagcaatttaaaaagcgtggcgcgcatacggca
ctggccgatattcaagaatcgattgatgagctgaagttctaccgcgaacactttatccgc
cagcctgcggtttaa
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