Iodobacter fluviatilis: C1H71_05940
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Entry
C1H71_05940 CDS
T06803
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl00521
Streptomycin biosynthesis
ifl00523
Polyketide sugar unit biosynthesis
ifl00525
Acarbose and validamycin biosynthesis
ifl00541
Biosynthesis of various nucleotide sugars
ifl01100
Metabolic pathways
ifl01110
Biosynthesis of secondary metabolites
ifl01250
Biosynthesis of nucleotide sugars
Module
ifl_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C1H71_05940 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C1H71_05940 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C1H71_05940 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C1H71_05940 (rfbB)
00525 Acarbose and validamycin biosynthesis
C1H71_05940 (rfbB)
Enzymes [BR:
ifl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C1H71_05940 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QBC43136
UniProt:
A0A7G3G7D2
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Position
complement(1352295..1353353)
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AA seq
352 aa
AA seq
DB search
MILVTGGAGFIGGNFVLDWLAQSDEPLINVDKLTYAGNLDTLASLKNDARHIFVRADIGD
KAVISELLAKYQPRAVINFAAESHVDRSISGPGEFIQTNVVGTFNLLEAVRGYWTDLAAD
NKTAFRFLHVSTDEVYGSLAVDDPAFTETKAYEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVILNALAGKALPIYGDGQQIRDWLYVKDHCSAIRRVLEA
GVVGETYNVGGWNEKPNLDVVHTICQILDERQPRSDGKAYAEQVTYVTDRPGHDKRYAID
ASKLERELGWKPAETFETGIAKTVDWYLTHQDWVQNVSSGHYQDWIDQQYGA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtcacgggtggtgcaggttttattggtggtaattttgtattggattggctg
gcccagtctgatgagccgcttattaatgtagataagctcacttatgctggcaatctagat
accttagcctcattaaaaaacgatgcacggcatatttttgtgcgcgcagatattggcgat
aaagccgtaatcagcgaattactggccaaatatcagccccgtgctgtgattaattttgcc
gctgaatcgcatgtggatcgatccattagcggcccgggcgagtttattcagaccaatgta
gtgggcacatttaatttgctagaagccgtgcgcggctattggacagatttagctgcggat
aataaaactgcttttcgctttttgcatgtgtctaccgatgaagtttatggctctttagcg
gttgatgaccctgcctttaccgaaaccaaggcttacgagccaaacagcccgtattccgca
tctaaagccgcatccgatcatttggttcgagcgtggcaccatacctatggactgccggta
ttaaccaccaattgctccaataattacggcccttatcatttccctgaaaagttgatcccg
ctggtgattctgaatgcccttgctggtaaagccttgccgatttatggcgatggccagcag
attcgcgactggctgtatgtaaaagatcattgcagcgccattcgccgcgtgttggaagcg
ggcgtagtgggtgaaacttataatgtaggcggctggaatgaaaagccgaatttagatgta
gtccacaccatctgccagattcttgacgagcgacagccgagaagtgatggcaaggcttac
gctgagcaagtcacctatgtaacagatcgccccggccacgataagcgctacgccattgat
gcgagtaagctagagcgagagctaggctggaaacctgcggaaacctttgaaacaggtatt
gctaaaacggtagattggtatctgactcaccaggattgggtgcagaatgtaagtagtggt
cattatcaggactggattgatcagcaatacggggcttaa
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