Iodobacter fluviatilis: C1H71_06460
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Entry
C1H71_06460 CDS
T06803
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ifl
Iodobacter fluviatilis
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifl03036
]
C1H71_06460 (xerD)
Chromosome and associated proteins [BR:
ifl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C1H71_06460 (xerD)
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
UPF0172
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
QBC43218
UniProt:
A0A7G3G7X5
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All DBs
Position
complement(1456153..1457076)
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AA seq
307 aa
AA seq
DB search
MSKRGMDEQLLLIDEFLDAVWLSDQLSKNTIDSYRRDLLIWAQWLLAERQCDLLNADREC
VQAFLARQARDMKAATLARRMASLRKFYRHWILSGQASFDPTAELTAPKRIRPLPKALDE
DRIKALLLAPELDQASGLRDRAMLELMYATGLRVTELVTLPLGQIKLRERYVQILAGKGG
KQRLVPMGEVAADWVEQYLAHSRPLLVGVHQVAEAFVNQRGHPLTRQGFWYIIKQYAAAA
GIDASHLSPHVLRHAFATHLLNHGADLRVVQMLLGHADITTTQIYTHVASARLKSLHKEH
HPRGSRS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcggcatggatgaacaattacttttaattgatgaatttttagatgctgtt
tggctgagtgatcagctttctaaaaataccattgatagttatcggcgtgatttgctgatt
tgggctcagtggctgttggcggagcggcagtgtgatctgctgaatgctgatcgggagtgt
gtgcaagcttttttagctaggcaggcccgcgatatgaaggcggccactttggcacggcgt
atggctagcttgcgcaaattttatcgacactggattttatcagggcaggcaagttttgat
cctaccgctgagctgaccgcgcctaaacggattcgccccttacctaaggccttggatgag
gatcgcatcaaggcgcttttattggctccagagcttgatcaggcaagtggcttaagagat
cgggctatgctggagctgatgtacgctaccggtttacgtgtgactgagttagttactctg
ccattagggcaaataaaattacgtgaacgttatgtgcaaatcttggcgggtaagggcggg
aagcagcgtttagtaccgatgggggaggtggctgctgattgggttgaacaatatttggcc
cattctcgacctttgttggttggagtgcatcaggtggctgaggcctttgttaaccagcgt
gggcatccgcttactcggcaagggttttggtacatcattaagcagtatgctgcagcggcg
ggtattgatgcgagtcatttaagcccacacgttttaaggcatgcatttgccacgcatttg
ttaaatcatggcgctgatttgcgggtggtgcaaatgttgctagggcacgctgatatcaca
actacgcaaatttatactcatgttgcatcggctcgtttgaaatctttgcataaagaacat
catccgcgtggttctcgttcataa
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