Iodobacter fluviatilis: C1H71_12510
Help
Entry
C1H71_12510 CDS
T06803
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ifl
Iodobacter fluviatilis
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifl03400
]
C1H71_12510
DNA repair and recombination proteins [BR:
ifl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1H71_12510
Archaeal homologous recombinant proteins
C1H71_12510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Lge1
ABC_tran
cobW
nSTAND3
TsaE
RsgA_GTPase
AAA_22
NTPase_1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QBC44271
UniProt:
A0A7G3GAH6
LinkDB
All DBs
Position
complement(2767428..2770838)
Genome browser
AA seq
1136 aa
AA seq
DB search
MKLLSLRLKNLNSLKGEWKIDFTAAPFKDNGLFAITGPTGAGKTTLLDAICLALYHQTPR
MSSISASSNELMTRHTSDCLAEVEFEVKGSRYRAFWSQRRARNLASGALQAPRVELADAT
GLILSDKINEKLKLTEVLTGLDFGRFTKSMLLAQGGFAAFLNAAANERAELLEELTGTDI
YGQISQSVFEQTRSSKQALDQLRAKASGVELLSEEQRSDLHTQTIDLAQTEQTLQSQLSQ
VQINRQWREALSKANSQHADAQSRQQAALAALASAQPQLDQLARSEPAAKLQVPYSALSL
ATEALTRTEQEQQQLTAQQGRALEIHRAKLWQAQQLATQLSQQSRTQLGQTQAAQSKLIS
TQRPEHAKLGEQLVGWRAQFKDLNTQASEISRLTTEIKQQDIQSLIEQQAALRLSVDSNQ
ATNQTALQAENTAQAAWQALLAGKDEAAFWEQKQSLLARSVDIAKLAELEIGRQKTQQQS
GDLAVAINEKQALLGQKELALATLRLTFSDLKQQVSDKKKLLEQEQRIQGLEEYRKQLQA
HEACPLCGSLKHPAIHDYQALNVSATAAALDAKQAELEKLTEEGQALKLDLTKLEAEIST
LESQQQRHLALVAEQLEQWNLLCNKLSTAAPDLAALSQQHSAALQAAEAALNQLAQNKAQ
LEQAQKVRLATDKALSDSQQALQLLTQKLENAQAHLKDLSQRLGKLAEHFATQSELLRLS
LPDQELPTDSHAWLGTQESLWQSWQAAQQQLQQLAQDLIIQQQAVNAAKQVENTRQQCWQ
ETGAASQAALADSHQPEADLAACTAQISSLQEQISQQKGREITLQKRRQEHEEQQQSASS
AWQSTLAASPFADEAAYIAARLEDDQRNALSALKQQLDNSLISANTLLSSAEQILAPLQA
EAKTALEIPELNEQLASLSAEITQLAQRQGEIRGALQGDDARRSGQSALFDEIAAKSVDY
DYWQHLNSLIGSADGAKYRKFAQGLTLDHLIHLANRQLERLHGRYQLMRKSTGELELGII
DTWQGDVARDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDGETLEIA
LDALDQLNASGKMIGIISHVEALKERIPVQLKIYKSSGLGISTLDKQYACAGETLK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcttagcctgcgtttaaaaaatctgaattctttaaaaggcgagtggaaaatc
gacttcaccgccgcgccctttaaagataacggcctatttgccattaccggccccaccggc
gcgggtaaaaccaccttgctggatgccatctgcctagcgctttatcaccaaaccccgcgc
atgagcagtatttcggccagcagcaatgagctgatgacccgccacaccagcgattgcctt
gcagaagtagagtttgaagtgaaaggcagccgctaccgcgctttctggagccaacgccgt
gcgcgtaatctggcaagcggcgcattgcaagcaccaagagtggagctggcggatgccact
ggcctgatcttgagcgataagattaatgaaaagctcaaactcaccgaggttctgaccggc
cttgattttggccgctttaccaaatccatgttgctagctcagggtggttttgcggccttt
ttaaatgctgcagccaacgagcgtgccgagcttttagaagagctaaccggcaccgatatt
tacgggcagatttcgcaatcggtattcgagcaaacccgcagcagcaagcaagcgctcgac
cagctgcgcgccaaggcttccggtgtcgagctacttagcgaagagcagcgcagtgactta
catacgcaaacgattgacttagcccagaccgaacaaacgctgcaaagccaattaagccag
gtgcaaattaatcgccaatggcgtgaagcactgagtaaagccaatagccaacacgctgac
gctcaatctcgccagcaagcagcccttgccgcacttgccagcgcccagccgcagctggat
cagctagcccgaagcgagccagcggcaaaactgcaagtgccttacagcgcgttaagccta
gccacagaggcactcacccgcacagagcaagagcagcagcagctaacagcacagcaaggc
cgcgcacttgagatacaccgagccaagctctggcaagcgcagcaactggctacgcaactc
agccagcagagccgcacccagcttggccaaacccaggcagcgcagagtaaattaatcagc
acccagcgccctgagcacgcaaaactgggcgagcaactggtaggctggcgagcacagttt
aaagacctaaatacgcaagcaagcgaaatcagcaggctaacaacagagattaaacagcaa
gatattcagtcgctgattgagcagcaagcagcacttaggctaagcgtcgatagcaatcaa
gcaacaaatcagacggccctgcaggcagaaaacaccgcgcaagcggcatggcaggccctt
ctggctggcaaagacgaggctgctttttgggagcaaaaacaaagcttacttgcgcgaagc
gtagatatcgctaagctggccgagttggaaatcggcagacaaaaaacacagcaacagtca
ggcgatctggcggtggcaatcaacgaaaaacaagcattattaggtcaaaaagaactggca
ctggcaacgctcaggctgacgtttagcgatttaaaacagcaggtcagcgataagaaaaaa
ctactagagcaagaacaacgcattcaaggcttggaagaatatcgcaagcaattgcaagcc
catgaagcctgcccgctctgcgggtctcttaagcatccggccattcatgattaccaagca
ctgaatgtttctgccactgccgccgcactagatgccaaacaggcggagctggaaaagctt
accgaagagggacaggcgctcaagcttgatctcaccaagttagaagcagaaatcagcacg
ctggaatctcagcagcaaagacatttagccctagtcgcagagcagcttgagcagtggaat
ctgctctgcaacaagctatcgactgcggcccctgatttagccgcattgagccagcagcac
agcgccgccttgcaagctgcagaagccgccttaaaccagctagcgcagaataaggcgcag
cttgagcaagcacaaaaagtaaggctcgccacggataaagcactgagcgatagccagcaa
gctttgcaattgctgacgcaaaagctggaaaacgcccaagcccatctaaaagatttaagc
caaagactgggcaagctggctgagcattttgccacccaaagcgagctgctgcggctctca
ttgcccgatcaagaacttcccactgacagccacgcttggctaggaacgcaagaatcccta
tggcaaagctggcaggccgcgcagcaacaattgcaacaactggcacaagatttaatcatt
cagcagcaagccgtcaatgccgctaaacaggtagaaaacaccaggcaacaatgctggcag
gaaacgggtgcagcctcgcaagcggcactggctgactcccaccagcccgaagccgattta
gccgcatgcaccgcacagatcagcagcctgcaagagcaaataagccagcaaaaggggcga
gaaatcaccctacaaaaacgcaggcaagagcatgaggagcagcagcaaagcgccagcagt
gcatggcagagcacgctggctgccagcccttttgcagatgaagccgcatatatagccgca
cgcttggaagacgatcagcgcaatgccttaagcgcgctcaaacagcagctcgataattcg
ctgatcagcgccaacaccctgctcagcagcgcggaacaaattttagcgccgctgcaggca
gaggccaaaacagcacttgaaatccctgagctgaatgagcaactggccagcctcagcgca
gaaatcacccagctggcccagcgccaaggggaaattcgtggggcattgcagggtgacgat
gcaaggcgcagtggccagtcggcgctgtttgatgaaattgcggccaagagtgtggattac
gactactggcagcatctcaacagcctgattggctcagccgatggtgcaaaatatcgcaag
tttgcacaaggcttaacgctggatcatctgattcatctggcaaaccgtcagttggagcgc
ctacatggccgctaccagctgatgcgaaaaagcacaggtgagctggaactgggaattatc
gatacctggcaaggcgatgtggcgcgagacaccaaaacattatctggcggcgaaagtttt
ctagtcagcctagcgctggccttagcgctgtctgacttggtcagccacaagacatcgatt
gactcgctatttttagatgaaggatttggcacgctagacggcgaaaccctagaaatcgcc
ctcgacgcgctcgatcagcttaatgccagcggcaaaatgataggcatcatcagccatgta
gaagccctaaaagagcgtattcccgtgcaattaaaaatctataaatcatcaggattaggc
ataagcacattagataagcaatatgcctgtgctggtgaaacgttgaaataa
DBGET
integrated database retrieval system
