Iodobacter fluviatilis: C1H71_12965
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Entry
C1H71_12965 CDS
T06803
Name
(GenBank) peptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl00550
Peptidoglycan biosynthesis
ifl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C1H71_12965
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifl01002
]
C1H71_12965
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ifl01011
]
C1H71_12965
Enzymes [BR:
ifl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C1H71_12965
Peptidases and inhibitors [BR:
ifl01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
C1H71_12965
Peptidoglycan biosynthesis and degradation proteins [BR:
ifl01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
C1H71_12965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
QBC44348
UniProt:
A0A7G3GB10
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All DBs
Position
2895154..2896296
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AA seq
380 aa
AA seq
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MISRLSVPIIFSLLIATSAQAFVPPVPDIAAKAYLLTDYQSGIQLAGRDPDSRVEPASLT
KLMTAYLTFKFVKEGKLKLDQQLTVSDKGWRTEGSRMFLDPKKPASVDDLIKGMIVQSGN
DACVTLAEAIAGSEEVFAQLMTREAKRLGMTGTNFKNSTGLPDPDHYMTVADLAKLAAAI
IHDFPEFYPIYSMKEFAYNNIKQPNRNLLLYRDPFVDGMKTGHTASAGYNLVASTKRDGR
RLISVVVGAASDEVRASESSKLLNWGIQFQETPRLYAAKQAVSNVAVWKGQLDKVNVGFL
ADRFITVPRGDAKNLKMAFTSTQPLIAPIKIGQNVGKLAVSLNGKQLVELPVVALEEVPE
ANIFGRAWDSIRMWFKSIFG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatctcccgtctttctgtacctattattttttccctcttaatcgcaacttctgctcag
gcttttgtaccgccggtgccggatattgctgctaaggcttatttactcactgattatcaa
agcggcattcaacttgccgggcgtgatccagattcgcgtgttgagcctgcttctttaact
aagctgatgacggcttatctcacttttaaatttgtgaaagaaggtaagttaaagcttgat
cagcagctcaccgtttcggataaaggctggcgcaccgaaggttcgcgcatgttccttgat
cctaaaaagcctgcctctgtagatgatttgattaagggcatgattgttcagagcggtaac
gatgcttgcgttaccttggccgaagccattgccggtagcgaagaagtttttgctcagttg
atgacgcgtgaagccaagcgccttggcatgactggcactaattttaaaaacagcaccggc
ttgcctgatcctgatcactatatgaccgtagccgatttggctaagcttgccgcggctata
atccatgactttcctgagttttaccctatctactcaatgaaggaattcgcctacaacaat
atcaagcagcctaaccgcaatttgctgctgtatcgcgatccttttgtagatgggatgaag
acgggccataccgccagcgcagggtacaacttggtggcctctactaagcgtgatggtcgt
cgtttgatctcggttgtggtaggtgcagctagcgatgaagtgcgtgctagcgaatctagc
aaattacttaactggggtattcagttccaagaaaccccgcgtttatatgctgccaagcag
gctgtttctaatgtggcggtttggaaaggtcagttagataaagtaaatgtgggcttttta
gcagaccgctttatcaccgtgccgcgcggtgatgctaaaaatctgaaaatggcctttacc
agcacccagcctttgattgccccgattaaaatcggccaaaatgtgggtaaattggcggta
agtttaaacggtaagcagctagttgaattgccggtagtggccttggaagaagtacctgaa
gccaatatctttggccgcgcatgggattcgatccgtatgtggtttaaatctatttttggt
tga
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