Iodobacter fluviatilis: C1H71_18260
Help
Entry
C1H71_18260 CDS
T06803
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl03420
Nucleotide excision repair
ifl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1H71_18260
03430 Mismatch repair
C1H71_18260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifl03400
]
C1H71_18260
Enzymes [BR:
ifl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1H71_18260
DNA repair and recombination proteins [BR:
ifl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1H71_18260
MMR (mismatch excision repair)
Other MMR factors
C1H71_18260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
ResIII
Viral_helicase1
AAA_22
NPHP3_N
AAA_11
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QBC45284
UniProt:
A0A7G3GDR2
LinkDB
All DBs
Position
complement(4044417..4046324)
Genome browser
AA seq
635 aa
AA seq
DB search
MHELEWDGEHQAIFNWLQQPDQYQSGLICARAGTGKTTTLVAAYKQLRSQGHTPLVLTFS
NSGRDTFIKRCRSHYPELPPPQAYTFDGYALRAFSQHSGRSRLKPRRLRPDTLANLIDMA
MHEAIDVINASLLEDEVRIARDSQTLSVLLQFIDDAKVSLSFNTRPFALWGDLDEEEDEY
DVDDTLMRLGISRQRYRLFKRFENARERLEFLAPGDAAFDLLREPEIIAKDLKQLGIQWV
LVDEFHDTKPVHEQILRHIHAAGIRMLAVGDDAQDIYEWRGLAPFSAFKAWKTQSAPFGL
SRSFRFGRPLDQMATRLIKPLGSKIEVRSKANHYTRPKLKKVSNDCDTSALLEDWQATGR
NLNECAILVREADRSKPVEDALFAAGMAYRMEGSRPYFLRHAALLCQALAYLANSCKEID
SSDVDAFLALIQSPVWEISEEQINNFQKELISRDHENKPLYRLDWLPDAYAILKGLIPAD
IAHLAFVRIKDSKTPLAIRLDELVDQLNLKPLVALSAPTARTAKARLQLFKALLTDFAAM
GPDALQKDWQKRRLRYQHFNKNRVVVSSVQQAKGREWAHVILPQLGAWQLKDGPDSANER
RHFYVAITRAREYLSILGNDTSIAQSPWLAEIGIK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaactggaatgggacggcgaacatcaggctatttttaactggctacaacagccg
gaccagtaccaatctgggcttatctgtgcgcgtgctggcaccggaaaaaccaccacactg
gttgccgcctataagcagttacgcagccaagggcatacgccactagtgcttaccttttca
aatagtggccgagacacctttattaaacgctgccgtagccactaccccgagctcccccca
ccacaagcttacacgtttgacggatatgcgctaagggcattttcccagcactctggccgc
tcacgccttaaaccacggcgcttacgtcctgatactttagctaatttaatcgacatggcc
atgcatgaagccatcgacgtcattaacgctagcttgcttgaagacgaagtgcgcattgcc
cgcgacagccagaccttgtccgtgctgctgcagtttatcgacgatgcgaaagtaagtctg
tcatttaatacccgcccttttgcactttggggcgatttagatgaagaagaagatgaatac
gacgtagacgataccctaatgcgccttggtattagccgccaacgttatcgcctattcaaa
cgctttgaaaacgcccgcgagcgcttagaatttcttgcaccgggtgatgcggcctttgat
ctgctgcgtgaaccagaaatcattgccaaagatttaaagcaactgggcatacagtgggta
ttggtggatgaatttcacgataccaaacccgtacatgagcaaatactgcgacatatacac
gctgcgggcatccgtatgcttgccgttggcgacgatgcgcaagatatttacgaatggcgc
ggcctagcccctttttctgcctttaaagcttggaaaacccaatcggccccctttggcctc
tctcgctcatttcgctttggccgcccgctggatcaaatggccacccgcctgattaaaccg
ctgggcagcaagattgaagtgcgctctaaagccaaccactacacccgccccaagttaaaa
aaagtcagcaacgactgcgataccagtgcgctgcttgaagattggcaggccactggccgc
aacctgaacgagtgtgcaatcttagtgcgcgaagccgatcgcagtaagccagtagaagac
gcactatttgccgcaggcatggcttaccgtatggagggcagccgcccttattttctgcgc
cacgcagcgctgctctgccaagccctcgcctacttagcgaacagctgcaaggaaatagat
agcagtgatgtagatgcgtttttagcactcatccaatctcctgtttgggaaatcagcgaa
gagcaaattaataatttccaaaaagagctcattagccgcgatcacgaaaacaaaccgctc
taccgcctagattggctacctgatgcttacgctattttaaaagggctcatccccgccgat
atcgcccacttggcgtttgtaagaataaaagacagcaaaaccccgctggccattcgcctg
gatgagctcgttgatcaacttaatttaaaaccattagtagcgttaagcgcaccaaccgcc
cgcaccgccaaagcacgcttgcaactttttaaagcgctattaaccgactttgctgcaatg
gggcccgatgcgctgcaaaaagactggcaaaaacgccgcctacgctaccagcattttaat
aaaaatcgcgtggtggtgagtagtgttcagcaagcaaaagggcgcgaatgggcacatgtg
atcttgccacagctgggggcttggcaattaaaagatggcccagacagcgctaatgagcgc
cgtcatttttatgtggcgatcacccgcgcccgcgaatacctaagcattttagggaacgac
accagcattgcgcagagcccgtggttagcagaaatcggcattaaataa
DBGET
integrated database retrieval system
