Iodobacter fluviatilis: C1H71_18450
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Entry
C1H71_18450 CDS
T06803
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl03030
DNA replication
ifl03430
Mismatch repair
ifl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1H71_18450
03430 Mismatch repair
C1H71_18450
03440 Homologous recombination
C1H71_18450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifl03032
]
C1H71_18450
03400 DNA repair and recombination proteins [BR:
ifl03400
]
C1H71_18450
Enzymes [BR:
ifl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1H71_18450
DNA replication proteins [BR:
ifl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1H71_18450
DNA repair and recombination proteins [BR:
ifl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1H71_18450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
tRNA_anti_2
UBA_HOIP
Motif
Other DBs
NCBI-ProteinID:
QBC45320
UniProt:
A0A7G3GCK0
LinkDB
All DBs
Position
complement(4087327..4090764)
Genome browser
AA seq
1145 aa
AA seq
DB search
MNLPSFIHLRLHSEFSVTDGIVRLDDAVKAAKSGGMPALGVSDLMNLFGIVKHYKACREA
GIKPIVGIDAWVENPDERDAPFRVLLICKNRAGYGRLCDLLSNAFRNNQYRGRAELKKEW
LTEGDNSPLICLSGAALGEIGQLLIGGQYDAALAAARWWADTFPDSFYLELQRTGFPSAE
PSLQGHLDLASDLDLPVVATHPVQFMDRDDYKAHEARVCIAEGNMVSDKRRPRLFTEEQY
FKSAAEMAKLFADIPEALLNSVAIAERCNLTIVLGKNYLPDFPTPEGMTLDDFLIFEAKR
GLEERLLLLYPDQAKRDSERPRYLERLKFETDTIVQMGFPGYFLIVADFIYWGKRNGCPV
GPGRGSGAGSLVAYSLGITDIDPTAYALLFERFLNPERVSMPDFDIDFCQENRWRVIEYV
REKYGVEAVSQIATFGTMAAKAVVRDVGRVLDLPYMFCDGLSKLIPAAPGKQYSLDDALE
MEPILKQRVENEDEVKELWVLAKKLEGLTRNIGMHAGGVLIAPGKITDFCPIYLASGADS
APVSMLDKDDVEKVGLVKFDFLGLRNLTIIELALNYIRTMEGSAPDLMLLGFEDPAAYKI
FRDANTTAVFQVESDGMKRLLAKLKPDRFEDIIAVLALYRPGPLGSGMVDTFINRKNKLE
EVDYFHPDLTACLDPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKAEEMAEHR
EKIAQGAALKGYDPKLAEQLFDLMAKFAEYGFNKSHTAAYAVVSYHTAWLKAHHCAAFMA
ATMSSELDNTDQLKVFYDDSVETNKLILLPPDVNHSFHKFVPVSRKEIRYALGAIKGVGE
SAVQMIVREREANGPFTNLYDFCRRTEKREVNKRTLEALIRAGAFDKIDPHRARLMANVE
QAMALAESEAANKNQSSLFDMLEAVDVPQVAMLEVPEWDERVKFAEEKNAVGFYISGHPF
DAHAKGIRQFIKSSLERLEPSRTPQMITGIVSALRIKNGDRGRMAFVTLDDGKSRRDVTV
YSEVFEANRNKIKEDTLLVIEGKVSEDRFSGGLRIIADTIYDIAEARSRFARSMTLAMRQ
GMDAQRLKSLLTLHRGGECPVEVDYQNTDAACIMSLGESWRITLRDELLAELKSWLGNEG
VSIKF
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccctcctttatccatttacgcctccactccgagttttcagttaccgacggc
atcgtacgcctagatgatgcggttaaagccgctaaatctggaggtatgcctgcgcttggg
gtttcggatttaatgaacctctttggcatcgtcaaacactataaggcttgccgcgaagcg
gggatcaagcccattgtggggattgatgcttgggtagagaaccccgacgagagagatgcg
ccctttcgcgtcctattaatttgtaaaaaccgagcaggttatggtcgcctttgcgatcta
ttatctaacgcctttcgcaacaatcaatatcgtggccgtgctgagcttaaaaaagaatgg
ctaacggaaggcgataatagcccgctcatctgcttatctggtgctgctttaggtgaaatt
ggccaactattaatcggcggccaatacgatgcggcgctagccgctgcgcgctggtgggca
gatacattccccgatagtttttatcttgagctacaacgcacgggcttccctagtgccgaa
ccgagcttgcaaggtcatttagatttagcctctgatcttgacctgccggtggttgccacc
catcccgtgcaatttatggatagggatgactacaaagcgcacgaagcccgcgtttgtatt
gccgagggcaatatggtgtcggataaacgccgcccgcgcttgtttaccgaagagcaatac
tttaaatctgccgcagaaatggccaagttattcgcagatattccagaggcattacttaat
tcggttgccattgccgagcgttgtaatttaaccattgtcttgggtaagaactatctaccg
gatttcccaacaccagaagggatgacgcttgatgacttcctgatttttgaggccaaacgt
ggcttagaagagcggctactgctgctctatccagatcaggcaaaacgtgattcagagcgc
ccgcgctatctagagcggcttaagtttgaaaccgacaccatcgtacaaatgggcttccct
ggctactttttgatcgtggccgattttatttactggggaaaacgcaacggctgtccagtt
ggccctggccgcggctcgggtgcaggctctttagtggcttacagccttggcattacggat
atcgaccccaccgcctacgccctgctgttcgagcgttttttgaacccagaacgcgtttcc
atgcccgatttcgacatcgacttttgccaagaaaaccgctggcgagtgatcgaatacgtg
cgtgaaaaatacggcgttgaggcggtcagccaaattgccactttcgggacgatggccgcc
aaagccgtcgtgcgcgatgttggccgcgtattagatctgccgtatatgttttgtgatggc
ttatccaagctcatccctgccgcgcctggcaaacagtacagccttgatgacgcgctagaa
atggaaccgatcttaaagcagcgcgtagaaaacgaagacgaagtcaaagagctgtgggtc
ttagccaaaaaacttgaaggcctaacgcgtaatatcggcatgcacgctgggggcgtcttg
attgcgcctggtaaaatcaccgatttttgcccgatttacctcgcatccggtgcggattcc
gcgccggtttcgatgctagataaagacgacgttgaaaaagtaggcttggtcaagttcgac
tttttgggcttacgcaacttaaccattatcgagctagcgctcaattacattcgcaccatg
gaaggcagcgcgcccgacttaatgctcttgggctttgaagaccccgctgcttacaaaata
tttagggatgccaataccaccgccgtatttcaggtggaatcggacggtatgaagcgcctt
ttggccaagctaaaacccgatcgttttgaagatattattgcggtattggcgctctatcgc
cctggcccactgggctcaggcatggttgatacttttatcaaccgtaagaataaacttgaa
gaagttgattacttccaccccgacctaacggcgtgcctcgatccaacttacggcgtgatc
gtgtatcaagaacaggtaatgcagatctcgcagattatcggcggctacaccctcggtggc
gcggatatgttacgccgcgcaatggggaagaaaaaagcagaggagatggccgagcaccgc
gagaaaatcgctcaaggtgcggcgctaaaaggctacgatccgaagcttgcagagcagctg
tttgatttgatggctaaatttgccgagtatgggtttaataaatcccacacggcagcctat
gcggtggtttcctaccacaccgcatggttaaaagcgcatcattgcgcggcctttatggcc
gccaccatgagctcggaactcgacaacaccgatcagctcaaagtgttttatgacgatagt
gttgaaactaataagctgattttattgccgcccgatgttaaccatagttttcataagttt
gtaccggtttcacgcaaggaaatccgctacgcactcggtgcgatcaagggtgtaggggaa
tccgccgtacagatgattgtacgtgagcgcgaggccaacggccccttcaccaatttatat
gatttttgccgtcgcactgaaaagcgcgaagtcaacaaacgcaccttagaagccctgatc
cgtgccggggccttcgataaaatcgacccgcaccgcgctcgcctgatggccaatgtagaa
caagccatggctttggccgaaagtgaagcggccaacaaaaatcaatctagcctgtttgac
atgctagaagcggttgatgtgccgcaagtggccatgcttgaagtgccagagtgggatgag
cgagtaaagtttgccgaagaaaaaaatgccgttggtttttatatctccggccaccctttt
gatgcgcacgccaaagggattcgtcaattcattaaatcgtctttagagcgtttagagcca
agccgtacgccacaaatgattactggcattgtaagtgccttgcggattaaaaatggtgat
cgtggccgcatggcttttgtgactttagatgatggaaagtcgcgccgagatgtgacggtt
tactccgaggtttttgaagccaaccggaacaaaatcaaagaagacacactcttagtgatc
gagggcaaggtttcagaagatcgcttttcaggaggcttacgaatcattgccgataccatc
tatgatattgccgaagcacgtagccgttttgcacgcagcatgacattagccatgcggcaa
ggcatggatgctcagcgccttaaaagcttgctaacattacatcgcggcggcgaatgcccg
gttgaagtggattaccaaaataccgatgctgcgtgcatcatgtctttgggtgaaagctgg
cgaataacattgcgcgatgaattgctggcagaattgaaaagctggctaggcaatgaaggc
gtttctattaagttttaa
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