Iocasia fonsfrigidae: GM661_01645
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Entry
GM661_01645 CDS
T07718
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ifn
Iocasia fonsfrigidae
Pathway
ifn03420
Nucleotide excision repair
ifn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GM661_01645
03430 Mismatch repair
GM661_01645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifn03400
]
GM661_01645
Enzymes [BR:
ifn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM661_01645
DNA repair and recombination proteins [BR:
ifn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM661_01645
MMR (mismatch excision repair)
Other MMR factors
GM661_01645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
HHH_5
DEAD
Motif
Other DBs
NCBI-ProteinID:
QTL96766
UniProt:
A0A8A7K505
LinkDB
All DBs
Position
323571..325607
Genome browser
AA seq
678 aa
AA seq
DB search
MDLARFLNTEQQKAVRALEGPVLVLAGAGSGKTRALTYRTARLIDNGVDPANILTLTFTN
KAADDMKGKIVKLLGKERIKGMWLGTFHSICLRILRDNLARVNRSEGCLIYDTTDSVDII
EDIILEFGLDDLEYEAKIAYNIIQKAKMELIAPEFLIKEYARENKGSQHYYQVLSRIYQE
YERVLLNNNSFDFNDLIKKTIELFSKYPEILREYQNRFKYVQVDEYQDVNHAQYQITSLL
SEPEGNIFVVGDDWQGIYGFRGADIKNILEFEKDYPRAEIIKLEQNYRSTNNIISVSNQL
ISNNKQNKEKTAWTKEGDGAPIFLTRAKNPQVEAAYVARRINDLVNHYNYSYKDIAVLCR
TNFQSHYIQQVFPRSHIPYQLIGGVSFFDRQEIRYFINYLRLLVNPEDGLALKRLFRIEA
DGVGDVLLSEINRYAREHKIQVADVLADPTRVKGIGEKKAANLIEFKLRVLDGIRGLRKM
KMPFPRKALQLYELIDFENNVINELGNTAERLKYINFFMEDIHNYHKYNPGSTLYDYLLI
NELLGGQDELEEDNTDSVKVMTAHSAKGLEFPVVFIIAVEEDVFPHQKSLEEAAAGSNPY
AVEEERRLLYVAMTRAEKILFMSFSQRKSGNNGEEKEVKPSRFLYELPVERMDLSSVDIL
RKSRRLQFKKDPTILKKN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatttagctagatttttaaatacggaacagcagaaagcagttagggccttagagggg
ccagtgctggtactggccggggccgggagtggtaaaacaagggcactgacatatagaacg
gccagattaattgataatggtgttgatcctgcgaatattttaacccttacctttacaaat
aaggcagcagatgatatgaaaggaaaaatagttaagcttcttggtaaagaaaggatcaaa
gggatgtggttgggaacctttcacagtatctgtctcaggattttgagggataatttagcc
agggtaaacaggagtgaagggtgccttatttacgatacgactgattcagtcgatattatt
gaagatataatactggagtttggtctggatgatctggagtatgaagctaaaatagcctat
aatataattcagaaggccaaaatggaattaatagcccctgagtttctgatcaaggagtat
gccagggaaaataaaggctcccagcattattatcaagtacttagcaggatatatcaggag
tatgaaagggtattgctcaataataattcctttgacttcaatgatctgattaaaaagaca
atagaattgttcagtaaataccctgagatattaagggaatatcaaaacaggtttaaatat
gtccaggtagatgaatatcaggatgtaaaccatgcacagtatcagattaccagtctgctg
tcagagccggagggaaacatatttgtggttggtgatgactggcaggggatatatggtttt
cggggggctgatataaaaaacatactggaatttgaaaaagattatccccgggctgagatt
attaaattggagcagaattatcgaagtacaaataatattataagtgtttctaaccaattg
ataagtaataataaacaaaataaagagaaaaccgcctggacaaaagaaggggatggtgcc
cctatatttttaaccagagccaaaaatccacaggtagaggctgcttatgtggctagaaga
attaatgatctggtaaatcactataattatagttacaaggacattgctgttctctgtaga
accaattttcagtctcattatattcagcaggtctttccacgttcacatataccttatcag
ctgattggtggtgttagcttttttgatcggcaggaaataagatattttattaactatctt
aggctcctggttaaccctgaggacggtcttgccctgaaacgcttattcagaattgaagca
gatggggtaggtgatgtccttttaagtgagattaatagatatgcccgtgaacacaagata
caggttgctgatgtcctggctgacccaacaagggtgaaaggtattggagagaaaaaagct
gctaatctaatcgagtttaaattaagggttcttgatggaattagggggcttcgtaagatg
aaaatgcctttcccccgtaaagcacttcaattatatgaactgattgattttgagaataat
gttattaatgagctggggaatacagcagagcgcttaaaatatattaatttttttatggaa
gacattcacaattaccataaatataatccaggtagtaccttgtatgactatctattgata
aatgaactcctgggcgggcaggatgaactggaagaggataatactgatagtgttaaggtg
atgactgctcattcggccaagggtttagagtttccggtagtgtttattatagcagttgaa
gaggatgtttttccacatcagaagagcctggaagaggctgctgcgggtagcaacccttat
gctgtggaagaagaaaggcggcttttgtatgtggctatgaccagggcagaaaagatatta
tttatgagtttttcacagcgcaagagtggtaataatggggaggaaaaggaagtaaaaccc
tccagatttctttatgaactaccagtggaaaggatggatcttagtagtgtagatatactt
agaaagagtagaagactacaatttaaaaaagatcctactattctgaaaaaaaactaa
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