Iocasia fonsfrigidae: GM661_02795
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Entry
GM661_02795 CDS
T07718
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ifn
Iocasia fonsfrigidae
Pathway
ifn02020
Two-component system
ifn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GM661_02795
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GM661_02795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifn03021
]
GM661_02795
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ifn02035
]
GM661_02795
Transcription machinery [BR:
ifn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM661_02795
Bacterial motility proteins [BR:
ifn02035
]
Flagellar system
Flagellar assembly proteins
Stator
GM661_02795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_23
MarR
PhyR_sigma-like
MarR_2
HTH_24
DUF7343
UPF0122
GerE
HTH_38
HTH_37
HTH_10
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
QTL96979
UniProt:
A0A8A7KC76
LinkDB
All DBs
Position
554030..554797
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AA seq
255 aa
AA seq
DB search
MPLADKEVAEIELWREFKENDSQAARQELIIKYLPQVKYQAGRLKMIVPDFIEQDDLESY
GVIGLIDALYKFDYRKGIKFKTYASRRIRGEIIDYLRKLDWLPHSVRREGKQLKSAADRF
FQKYGRRPSVDELATALNISKEKVSKLYYQIYSSQWVSVHEEIGDVELLDLLKEDQKSQP
EVVYHRKNSERLLSEAIEHLNESERLVISLYYYEGLTQAEIAEVMELSSARVSQLHKKAI
YRLRGSLARKKEQLL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccacttgcggataaggaagtagcagagatagaattatggcgggagtttaaagaaaat
gattcccaggctgcccgacaggaattaattattaaatatctccctcaggttaaataccag
gctggtaggttaaagatgattgtacctgattttatagagcaggatgacctggagagttat
ggggtaataggattgattgatgccctatataagtttgattaccgaaagggaattaagttt
aaaacctatgccagcaggaggatccggggagagattattgactatctccgtaagctggac
tggctgcctcactcagtacgccgggagggtaagcaattaaagtctgctgctgatagattt
tttcagaaatacggcaggcgcccttctgttgatgaactagcaacagctcttaatatctct
aaagaaaaggtcagcaaactatattatcagatttattcctctcagtgggtttctgtccat
gaagagataggtgatgtggaattacttgatctactaaaggaagaccagaagagtcaacct
gaagtagtttatcatagaaaaaacagtgaaagattactgtcagaggccattgaacatttg
aatgaatctgaacgattggttatttctttatattattatgaaggcctcactcaggcggaa
attgctgaagttatggaactgtcttcagcccgggtttcccagcttcacaaaaaagctatt
tatcgactgaggggttcactagcccgcaagaaagagcagttgttgtaa
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