Iocasia fonsfrigidae: GM661_05930
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Entry
GM661_05930 CDS
T07718
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ifn
Iocasia fonsfrigidae
Pathway
ifn03410
Base excision repair
ifn03430
Mismatch repair
ifn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GM661_05930 (recJ)
03430 Mismatch repair
GM661_05930 (recJ)
03440 Homologous recombination
GM661_05930 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifn03400
]
GM661_05930 (recJ)
DNA repair and recombination proteins [BR:
ifn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GM661_05930 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GM661_05930 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GM661_05930 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
MarR_2
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
QTL97552
UniProt:
A0A8A7KI50
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Position
1244390..1246687
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AA seq
765 aa
AA seq
DB search
MKTAINYQKDIYIPEWLERELDGNQLLARILLQRGINTQEKVKRFLDPEHYQATVPAEFP
GMEEAVDRILTAVKAKKKICIYGDYDVDGVTSTVILLDLLNKIKGQAVYHLPDRFKEGYG
MNKAVLRRLAGEVDLIITCDCGISNQEEIALAKELGLEVIVTDHHQLPDKLPLADLILSA
KLLAEDHQAFNIPGAGMAYFLAVAILNKLGIAEESKDFLDLLSMAIVADVVPLLEENRYL
LQLGLPELVNTKRPGLIELFKVAGIADPQNMTEEDIAFRIAPRLNSAGRILKADLAVELL
LADEEFLARKKAIELEAVNQRRKKLQDKVIEEALEMLGENRDRKSIVLYRPHWKQGVIGI
AAGRLCEDYQVPVLLMCQKDDGQTVTGSARSIPSINIIQQLKECKRYLTKYGGHAGAAGF
SLQRDNLTGFSKNISSLLAKELAEKETDRVIDIDGELSLDKVGKKDYYALRRLAPFGEQN
PKPKFIAYDTELIHSRTTSGDRHLRLILAQNGVQHSAIWWWAGKKKLAKKVDLIYSLDIN
DFQGERILQLLVDDILTENRQVEKVVEKSNGLEFELLDYRNWQGKKLELPVFADAAYYYE
GINKIKDKEIINRYQLTDKKSLVLLSCPPSLEIFRELIYANRPAKLVLAFSKADITGSTF
LQQLTGLIKYIINKKGGQLDVYQIAVLTGQLESTIVAGLQYLEAKGYISLNSFNPRYYIV
RNGEGKVKHENKMYLKNIKDLISETRSFIKYILSMDLSIIKNLIG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcaattaattatcaaaaagatatctatataccggaatggttagagcgagag
ctggatggtaatcagctgctggccaggatattattacagagaggcattaatacccaagaa
aaagtcaaacgttttctggatcctgaacattatcaggcaactgttccagctgagtttccc
gggatggaagaggccgtggataggatattaactgcagttaaagctaagaaaaagatttgt
atttatggtgattatgatgtagatggtgtaacctcaacggtgattctgctggatttgctc
aataaaataaaggggcaggctgtctaccatctacctgatagatttaaagagggttatggg
atgaataaagcagtgctcaggagactggccggagaagtagatttaatcattacctgtgac
tgtggtatctccaatcaggaagagattgctctggctaaagaactgggtctggaggtaatc
gtaacagaccatcaccagttaccagataaacttccgctggctgaccttattctttcagct
aaactactggccgaggatcatcaggcctttaatattcctggggccggtatggcttatttc
ctggctgttgctattttgaacaagctgggaatagcagaagaaagcaaggattttctggat
ttattatctatggccattgttgctgatgtggtccccttactggaagaaaaccgttacctt
ttacagctaggtttaccagaactggttaatacgaaaagacctggtctaattgaattattt
aaagtggccggtatagctgatccccaaaatatgactgaagaagatattgccttcagaata
gcacctaggcttaattccgctggtcgaatattaaaagcagatctggcagtagaattattg
ttagcagatgaagaatttttagcccggaaaaaagctatagaactggaagcagttaatcag
cgccggaaaaaattacaggataaagtaattgaggaagccctggagatgctgggagaaaac
cgagacaggaagtcgattgttttataccgtcctcactggaagcaaggtgttattggtatt
gctgctggcaggttgtgtgaggattaccaggttccagttttattaatgtgtcagaaagat
gatggtcagaccgtgactggttctgcccgttctattcccagtattaatattattcagcag
ttaaaagaatgcaaaagatatctgactaaatatggtggccatgctggagcagctggtttc
tctctgcaacgagacaatctgaccggttttagtaagaatataagtagtcttttagctaaa
gagttagctgaaaaagaaacagatcgagtgattgatattgatggggaattatctctggat
aaagttggcaagaaggattattatgctttaagaagactggccccctttggggaacagaat
ccaaaacctaaatttatcgcttatgatacagaacttattcatagtaggactactagcggt
gatcgtcatctgcgtttgattctggctcagaatggagtgcaacattctgctatctggtgg
tgggctggcaagaagaaactggctaagaaagttgatctaatctattccctggacatcaat
gattttcagggagaaagaatactacaactgcttgttgatgatatcttgactgaaaacaga
caagttgaaaaggtagtggaaaaaagtaatggtctggaatttgagctgcttgattaccga
aactggcagggcaagaaattggagctacctgtttttgctgatgctgcttattattatgag
ggaataaataagataaaagataaggagataattaaccgttatcagctgactgataaaaag
agcctggttttattaagctgtccaccttcactggagatatttagggaattaatctatgcc
aatagacctgcaaaactggtgctggctttttcaaaagctgatattactggtagtactttt
ttgcagcagctgactggcttaataaagtatataataaataaaaaaggtggacagctagac
gtctatcaaatagccgtactaaccggtcaactggagagtactattgtggcaggtctgcag
taccttgaggctaaaggatatattagtttaaatagttttaatcccagatattatattgtt
agaaatggggaaggcaaggtaaagcatgaaaataaaatgtacctgaaaaacatcaaagat
cttatttcagaaacaaggtcatttataaaatatatcctttcaatggatctatcaattata
aaaaatttgattggttaa
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