Iocasia fonsfrigidae: GM661_08325
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Entry
GM661_08325 CDS
T07718
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ifn
Iocasia fonsfrigidae
Pathway
ifn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GM661_08325 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifn03021
]
GM661_08325 (rpoD)
Transcription machinery [BR:
ifn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM661_08325 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
HHH_RecD2
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
QTL97985
UniProt:
A0A8A7KD07
LinkDB
All DBs
Position
1744771..1745859
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AA seq
362 aa
AA seq
DB search
MTEKNELNSIKIAEVKELIEKGKKEGSLTYEEIMDALEEIDLGSDEIEKIYELFNEMNID
ILDNNNDDEDKQEDDEEHLDISIPDGVGIDDPVRMYLKEIGKVPLLTAEEEVKLAKGMEA
GDEACKRKLIEANLRLVVSIAKKYVGRGMLFLDLIQEGNMGLIKAVEKFDYRKGYKFSTY
ATWWIRQAITRSIADQARTIRIPVHMVETINKLIRVSRQLLQEIGREPTPEEIGEEMDMS
AEKVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDEDAPAPASAASFILLKEQLDDVLDT
LTDREKRVLELRFGIEDGRPRTLEEVGKEFGVTRERIRQIEAKALRKLRHPSRSKKLKDY
LD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaaaaaaatgaactcaattctataaaaattgctgaggttaaagaactaatagaa
aaaggtaaaaaagaaggaagcttaacatatgaagaaataatggatgcccttgaagaaata
gaccttggctctgatgaaatcgaaaaaatttatgagctgtttaatgaaatgaatatagat
attcttgataataataatgatgatgaagataaacaggaagatgatgaagaacatttagat
attagtatacctgatggtgttgggatagatgacccggtaagaatgtatctaaaagagata
ggtaaggttcctttattaactgctgaggaagaggttaaacttgccaaaggtatggaggca
ggtgatgaggcctgcaaaagaaagcttattgaagccaatctacgtttggttgtaagtata
gccaagaaatatgttggccgtggtatgctatttcttgatctgattcaggaaggtaatatg
ggtttgattaaggctgtagaaaagtttgactatcgcaagggatataaatttagtacttat
gccacatggtggattagacaggcgataacacgttctatagctgatcaggcacgaacaata
cgtatacctgtccacatggttgaaactataaataaattaatcagggtttcacggcagtta
ttacaggaaataggtagagagccgacacctgaagagataggtgaagaaatggatatgtct
gctgagaaggtaagggaaataatgaagattgcccaggaacctgtttcacttgaaaccccg
atcggggaagaagaagatagccatcttggtgattttattgaagatgaagatgctcctgca
ccagcgtcagctgcatcctttattttacttaaggaacagttagatgatgttcttgatacc
ttaactgatagagaaaaaagggttctggaattgagatttggtattgaggatggacgtcca
agaaccctggaagaggttggtaaggaatttggtgtaaccagggaaagaattagacaaata
gaggcaaaagcattaaggaaattgaggcaccctagtagaagcaagaaattaaaggattac
ttagattaa
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