Iocasia fonsfrigidae: GM661_10865
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Entry
GM661_10865 CDS
T07718
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ifn
Iocasia fonsfrigidae
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifn03032
]
GM661_10865 (topA)
03400 DNA repair and recombination proteins [BR:
ifn03400
]
GM661_10865 (topA)
Enzymes [BR:
ifn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GM661_10865 (topA)
DNA replication proteins [BR:
ifn03032
]
Prokaryotic type
DNA Topoisomerases
GM661_10865 (topA)
DNA repair and recombination proteins [BR:
ifn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GM661_10865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
RNA_pol_Rpb1_1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QTL98435
UniProt:
A0A8A7KEA7
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All DBs
Position
complement(2260581..2262668)
Genome browser
AA seq
695 aa
AA seq
DB search
MGRRKKSGTLVIVESPAKAKTIAKFLGRGYKVEASMGHVIDLPKSKLGIDIENNFEPKYI
TIRGKGKVLKNLRKAVKKSDDVLLATDPDREGEAISWHLYRALKLDKEDARIEFNEITKT
AIKNALKNPRPINQNLVDAQQARRLLDRLVGYRLSPLLWKKIRKGLSAGRVQTVAVKIIC
EREKEIEAFEPEEYWTIKVVLEKDSNDFEAELKRINGKKFKISNQEEANNILEEVKKEDF
IVEQVKDRKRRRNPNSPFTTSTLQQRAASQLGYSAKKTMYLAQQLYEGIDIGEEGTVGLI
SYIRTDSTRISDEARGEALNYIRNEFGDKYVSSKDKKYKKQEGAQDAHEAIRPTSVVHTP
ESLKNKLTNDQYKLYDLIWRRFVASFMSPAVYRLLTVTINAGEKYRFNVSGSQIVFPGFL
RVDSSSQKKDVILPEMQKGEKLAPKEFLPDQHFTQPPPRFSEASLVKTLEEEGIGRPSTY
APTISTVISRGYVERDGRQLKPTELGIIVTDLLSEHFPDVTDIEFTAQMEDRLDNVEEGN
DQWKEVLVDFYEPFAKRLEIATEEMDSVQLEEEVTDEVCEKCGKPMIVKYGRYGKFLACS
GYPDCKNTKPFLIKTGVACPECEDGELIQRKSRKGRVFYGCSNYPDCEYVLWNKPVDKEC
PDCEGIMVEKRSKSKGLVYKCINKECGFEEKTADI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagaagaaaaaaaagtggtaccttggtgattgttgaatcaccagctaaagctaaa
acaatagcaaagtttcttggtaggggttataaggttgaagcatcaatgggacatgtaatt
gatctgcctaaaagtaaactgggtattgatatagaaaataattttgaacctaaatatatt
actatcaggggcaagggtaaggttttaaaaaacttacgcaaggctgtcaaaaaatcagat
gatgtattactggcaacagaccctgaccgtgaaggagaagctatttcctggcatctttat
cgtgcccttaaacttgataaagaagatgctaggatagaatttaatgaaataactaagaca
gctattaaaaatgcccttaagaatccgcgcccgattaatcaaaatctagtagatgcccaa
caggccagacgattacttgatagactggtggggtatagattaagccctctcctctggaaa
aagatcagaaagggtttaagtgccgggagggtacagacagttgcagttaaaataatatgt
gagcgtgaaaaagagattgaagcctttgaacctgaagaatactggacaattaaagttgtt
ttagaaaaagatagtaatgattttgaggcagagttaaagagaattaatggtaagaaattt
aaaattagtaatcaggaagaagccaataatatcctcgaagaggtaaaaaaagaagatttt
attgtagaacaggttaaggataggaaaagaaggagaaatccaaattcaccttttacaacc
agtactttacagcagagggcagccagtcaattgggctattctgccaaaaaaactatgtat
cttgcccaacaactctatgaaggtattgatattggtgaagaggggacagttggtcttata
agttatatcaggactgatagtacaagaatatctgatgaagccagaggggaggctttaaac
tatattcgtaatgagttcggtgataaatatgtttccagtaaagacaaaaaatataagaag
caggaaggggcccaggatgcccatgaagccatcaggcctacttcagtagttcatacccct
gaaagccttaaaaataaattgacaaatgatcaatataaattatatgatttaatatggcgc
cgctttgtagctagttttatgagtccggcagtttatagactattgacagtaactattaat
gcaggtgaaaagtatagatttaatgtctcgggttctcagatagtctttccaggtttttta
cgggttgattcaagcagccagaagaaagatgtgattctacctgaaatgcaaaagggtgag
aaattagctccaaaggaatttctacctgaccagcattttacccaaccaccaccacggttt
tctgaggcgagtctggttaaaacacttgaagaagagggcattggtcgtcccagtacttat
gctccaacaatttcgactgtaatttcccgtggttatgttgaaagggatggaagacaatta
aagcctactgaactgggaattatagttactgacttattaagtgaacattttccagatgtg
actgatattgaatttaccgctcagatggaggataggcttgataatgtagaagagggtaat
gatcagtggaaagaggtcttggttgatttttatgaaccatttgctaaaaggcttgaaata
gctacagaggaaatggatagtgttcaactagaggaagaagtaactgatgaagtctgtgaa
aaatgcggtaaacctatgatagttaaatatgggagatatggtaaatttttagcctgttct
ggttatccagattgtaaaaatactaaaccatttctcattaagaccggtgtagcttgtccc
gaatgtgaggatggtgaattaattcaacgtaaaagtagaaaaggcagggtgttttacggc
tgctctaattatccagattgtgaatatgtactctggaataaaccggtagataaagaatgt
ccagattgtgaaggaattatggttgaaaaacgcagtaagagtaagggtttagtctataag
tgtattaataaagaatgtgggtttgaggaaaagacagcagatatctag
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