Iocasia fonsfrigidae: GM661_12490
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Entry
GM661_12490 CDS
T07718
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ifn
Iocasia fonsfrigidae
Pathway
ifn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GM661_12490 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifn03400
]
GM661_12490 (mutM)
Enzymes [BR:
ifn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GM661_12490 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GM661_12490 (mutM)
DNA repair and recombination proteins [BR:
ifn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GM661_12490 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Rad50_zn_hook
Auto_anti-p27
Zn_ribbon_6
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QTL98724
UniProt:
A0A8A7KKW0
LinkDB
All DBs
Position
complement(2592805..2593629)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETIVQGLSKVIIGKEIMEIIIREEKIIAYPSSSDFRKQLINKKIIGIRRRGKY
ILIMIEDELTLVIHLRMTGKLFLKPSDLTFDKHSHIIFRLDNAIDLRFNNVRKFGRMYLV
DDNSWERAGGLDKLGPEPLDDDFTLGDFHKMLKKRKSNIKALLLNQSFLAGLGNIYVDEA
LFRAGILPFRRTDTLKNREIERLYKGIRNVLKMGIKYGGTSFRDYRNARGEKGSFQKKLL
VYQREGKECPVCGEEIVKEKVAGRGTHFCPHCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaacttccagaagtagagacgattgtgcagggattaagtaaggttattatagga
aaagaaataatggagataattattcgtgaagaaaaaataatagcttatccttcaagttca
gatttcaggaaacaattgattaataaaaagattattgggataagaaggcggggtaagtac
attctaattatgattgaggatgagttgacactggttattcacttgagaatgaccgggaaa
ttattccttaaaccctctgatctcacctttgataaacacagccatataatctttagatta
gataatgctatagatctgaggtttaataatgtaaggaaatttggtcgaatgtatctggta
gatgataatagctgggaaagggcagggggactagataaacttggtcctgaaccattagat
gatgattttaccctgggtgatttccataaaatgttaaagaagaggaagagcaatattaag
gccttacttcttaaccagtcctttctggctggattgggaaatatctatgtggatgaagcc
cttttcagagccggtatacttccctttagaaggacagatacccttaaaaatagggaaatt
gaaagactgtataagggaataagaaatgtgcttaaaatgggtattaagtatggggggaca
tcatttagagactaccgtaatgcccggggagaaaaaggtagttttcagaaaaaattgctg
gtttatcagcgggaagggaaggaatgccctgtttgtggagaagagatagtaaaggagaaa
gtggcagggagggggacccatttttgtccccattgtcagaaatag
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