Iocasia fonsfrigidae: GM661_12555
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Entry
GM661_12555 CDS
T07718
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ifn
Iocasia fonsfrigidae
Pathway
ifn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM661_12555 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifn03019
]
GM661_12555 (recQ)
03400 DNA repair and recombination proteins [BR:
ifn03400
]
GM661_12555 (recQ)
Enzymes [BR:
ifn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM661_12555 (recQ)
Messenger RNA biogenesis [BR:
ifn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GM661_12555 (recQ)
DNA repair and recombination proteins [BR:
ifn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GM661_12555 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
GerE
HTH_38
Cas3-like_C_2
TniB
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QTL98736
UniProt:
A0A8A7KAE8
LinkDB
All DBs
Position
complement(2609264..2611381)
Genome browser
AA seq
705 aa
AA seq
DB search
MLAKAKEILRKYYGYQGFREGQQRVINSILKGSDTVAIMPTGSGKSICYQVPAMLFSGVT
IVISPLISLMKDQVDALDEMGIPATFLNSSITYQQLNDRLDRTRQGEYKLIYIAPERLES
PRFCQLMNSLEVSLIAIDEAHCVSQWGHDFRPSYLYIAKMINNLNNRPVVAAFTATATPE
VRDDIAIQLALLDHGLYISGFDRGNLTFTLRKGIDKEQFILNYIKSNSSESGIIYAATRK
EVDRLTKVLLNAGYRAGRYHAGLTDLERHETQEAFLFDEINIVVATNAFGMGIDKSNVHF
VIHYNMPKNIESYYQEAGRAGRDGEPSECVLLYSSGDSHIQRFLIEQNEVSPARKQKQLE
KLQKMIDYCHTSQCLRAYILNYFGDKNVAKSCANCSNCNDDRELVDISKEAQKILSCVYR
LEQSWGITTVAQVLAGSRSKKILQNNFDKLSTYDIMPSYTIKEIKDMINMLAADNYLKIT
EGKYPVVQLNERSYRVLKGEESVEQRVEKRAHKISFDDPLFEILKELRREIAKEEGIPPY
IIFHDSTLREMSRYYPVKKGVMLKITGVGELKFAKYGERFMEAIRVYVTENGLEDQVNRV
KVKQSSSVRNSHLLSYKLFKAGKGIKDIAEERGLSTNTIENHIFRCYKEGLDIDIDFLIP
DEYEDKITAAVEEQGSDRLKPIKEVLPDEVSYTAIKAVLCKQTRE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgttagcaaaagctaaagaaattttaaggaaatattatgggtatcaaggtttcagggaa
ggccagcagagggttatcaatagtattttaaagggaagtgatacagttgctattatgccg
actggttctggtaaatcaatctgttatcaggtgccggcaatgcttttttccggggttact
attgttatttcaccattaatatcattaatgaaggatcaggtagatgccctggatgagatg
ggaataccagctacctttcttaatagttcaattacatatcagcagttaaatgacaggttg
gataggactagacagggtgaatataaattaatttacatagcccctgaacgcctggaatca
ccaaggttttgtcaattaatgaattccctggaggtttctttaatagctattgatgaagca
cactgtgtttctcaatggggacatgatttccgtcccagttatttatatattgctaagatg
ataaacaacttaaataataggccggttgttgcagccttcacagctacagctaccccggaa
gtcagggatgatatagcgatacaactggctttgctggatcacggactatatataagtggt
tttgatcgggggaatttaacctttactttacgtaaaggtattgataaagagcagtttatt
ttaaactatatcaaatcaaatagctctgagtccggtattatttatgctgctacccgtaaa
gaagtagataggcttacaaaagttttattaaatgccggctaccgtgcaggacgttatcat
gctggtttaactgatttggagaggcatgaaacacaggaagcctttttatttgatgagatt
aatattgttgtagctaccaatgcctttggcatggggattgataaatcaaatgttcatttt
gtaatacattataatatgccgaaaaatatagaatcatattatcaggaagcaggtagggca
ggtagggatggtgaacccagtgaatgtgttttattatattcttctggagacagtcatatt
caaaggtttctaattgagcaaaatgaagtttcacctgctagaaaacagaaacagctggag
aaactacagaagatgattgactactgtcatacctcacaatgtctgcgtgcttatattcta
aattattttggagataaaaatgttgctaaaagctgtgctaactgtagtaactgtaatgat
gatcgggaattagtagatataagcaaagaggcacagaaaatactatcctgtgtatatcgt
ctagaacaaagttgggggattactactgttgctcaggtcttggctggttccaggagtaaa
aaaatattgcaaaataattttgataaactgtcaacctatgatatcatgccttcttataca
attaaagagattaaggatatgattaatatgctggccgcggataattatttaaagataact
gaaggtaaataccctgtagtccaattaaatgaacgttcctatagggtattaaagggtgaa
gaaagtgttgaacagagggtagaaaagagagcgcataagattagttttgatgaccctctc
tttgagattttaaaagagttgcgcagggaaattgctaaagaagagggtattccaccatat
ataatttttcatgacagtactctaagggagatgagccgctattaccctgttaaaaaagga
gttatgcttaagataacaggtgttggggagcttaagtttgctaaatatggtgagcgtttt
atggaggctatcagggtgtatgtaacagaaaatggtctggaagatcaggtgaacagggta
aaagttaaacaatcgtccagcgtcagaaatagtcatttgctgagctataaattatttaaa
gcaggtaaggggattaaagatattgctgaagaacgtggattatctactaatacgattgaa
aaccatatttttaggtgttataaggaaggtttagacattgatatagactttttaatcccg
gatgaatatgaggataagataactgctgctgttgaagaacagggtagtgatagacttaaa
ccaatcaaagaggttttacctgatgaagtaagttatactgctattaaagcagttctttgt
aagcaaacaagggaataa
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