KEGG   Iocasia fonsfrigidae: GM661_13510
Entry
GM661_13510       CDS       T07718                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
ifn  Iocasia fonsfrigidae
Pathway
ifn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ifn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GM661_13510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifn03019]
    GM661_13510
   03009 Ribosome biogenesis [BR:ifn03009]
    GM661_13510
Enzymes [BR:ifn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GM661_13510
Messenger RNA biogenesis [BR:ifn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GM661_13510
Ribosome biogenesis [BR:ifn03009]
 Prokaryotic type
  rRNA helicases
   GM661_13510
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: QTL98906
UniProt: A0A8A7KAU7
LinkDB
Position
complement(2804860..2806443)
AA seq 527 aa
MKKIKFEELKISRDVLKAIEDMGFEETTPIQTNAIPPALEGRDIIGQAQTGTGKTAAFGI
PLLERVDPDNKNPQAIILCPTRELAIQVAEELKRLARYKRNLHTLPVYGGQSIKRQIKVL
KKGVQVIIGTPGRVMDHMRRGTLQLSGIDFLVLDEADVMLDMGFIDDIEKILEDIPQDRQ
TLFFSATIPKTIINLGKRYQKDAKLIRIAHENLTAPSIEQYYYEIKRGDKLKVLTRLIDM
HLPQLSLIFCNTRKQVDELNIQLQARGYLADALHGGMNQNQRDRVMDKFRNGIIEHLVAT
DVAARGIDVDNVEAVFNYDLPQDTDYYVHRIGRTGRAGKTGTAYTFVVGKDIYKLRDIQK
YTKIKIERQNIPSLNDIEEVQIEKFVSSLKKYIEKEHLGKHTKIIEGLLEDDYTAIELAA
GLLKMSLTDEKEEENDYRDNFGDTGAEPGMVRLFINIGKKDKISPRHIVGAIAGETDLEG
KLIGAIDVYNNFTFVEVPSEMGAHVLNIMKDNYIKGNKVNVEPAKPK
NT seq 1584 nt   +upstreamnt  +downstreamnt
ttgaaaaaaattaaatttgaagaactaaagatatccagggatgtattaaaggcaatagaa
gacatgggatttgaagaaactacccccatacaaacaaatgctattccgccagcactagag
ggcagagatattataggacaggcgcaaacaggaacaggaaagacagcagcttttgggata
cccttattagaaagggttgacccagataataaaaatccacaggcgattatattatgtcct
accagggaattagcaattcaggttgctgaagaattaaagagattggccagatacaaacgg
aatttacatactctacctgtttatggtggacaatctattaaaagacagatcaaggtctta
aaaaagggagtacaggttattattggtacacctggtagggtgatggatcatatgcgaagg
ggtacattacagttatctggtatcgattttcttgtattagatgaagccgatgtgatgcta
gatatgggctttattgatgatattgaaaaaatattagaggatattccacaggataggcag
actttatttttttctgctacaatacctaaaacaataattaatctgggtaaaaggtatcaa
aaggatgcaaaattaataagaatagctcacgaaaatttaacagcacctagtattgaacaa
tattattatgagattaaaaggggagataaactaaaggttttaacacgtttaattgatatg
cacctccctcagttatccttgattttttgtaatacaaggaaacaggttgatgaattgaat
atacagcttcaggccaggggatatcttgcagatgctttacacggtggtatgaatcaaaac
cagcgagatcgggtaatggataaatttaggaatggtattatagagcatttagttgctaca
gatgtagcagcccgtggtattgatgtagataatgtggaagctgtttttaactatgacctt
cctcaggatactgattattatgtccatagaattggcaggacaggtcgagcgggtaagacg
ggtaccgcctatacctttgttgtcggtaaagatatctataaactgcgtgatatacaaaaa
tatactaagataaaaattgagcgccaaaatataccttcacttaatgatatagaagaagta
cagattgaaaaatttgttagtagtttaaaaaaatatatagaaaaagaacatttaggaaaa
cataccaaaattattgaaggtttgcttgaagatgattatacagcaatagaacttgcagct
ggattactaaaaatgtctttaacagatgaaaaagaagaagagaatgattatagagataat
tttggggatactggtgcagaaccaggtatggtcaggttgtttattaatataggtaagaag
gataagatcagtcctagacatattgtgggggcaattgccggggaaacagatctggaagga
aaactaataggggctattgatgtttataataactttacttttgttgaagtccccagtgaa
atgggtgcccatgtcttaaatattatgaaggataattatattaagggaaataaggtgaat
gttgaaccagctaaacctaaatag

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