Iocasia frigidifontis: GM661_14005
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Entry
GM661_14005 CDS
T07718
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ifn
Iocasia frigidifontis
Pathway
ifn03030
DNA replication
ifn03430
Mismatch repair
ifn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM661_14005
03430 Mismatch repair
GM661_14005
03440 Homologous recombination
GM661_14005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifn03032
]
GM661_14005
03400 DNA repair and recombination proteins [BR:
ifn03400
]
GM661_14005
Enzymes [BR:
ifn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM661_14005
DNA replication proteins [BR:
ifn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GM661_14005
DNA repair and recombination proteins [BR:
ifn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GM661_14005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
CcmE
DUF655
Phasin_2
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QTL98993
UniProt:
A0A8A7KAY2
LinkDB
All DBs
Position
complement(2910548..2913937)
Genome browser
AA seq
1129 aa
AA seq
DB search
MTANFVHLHVHTEYSLLDGALRIKDLVQYSKELAMPAVAMTDHGVLYGAVDFYRQAVREG
IKPIIGCEVYLAPGSRFEKSKRERYHLVLLAMDNEGYHNLIKLVSQAWLEGFYYKPRVDK
DLLYEHHKGLVALSACVQGEIPQLILKGKEEKARETSLEYREIFGKGNFYFELQDHHLGD
EKKVNSHLIKLGKELNIPLLVTNDVHYLKQSDAELHDVLLAMQTGKTVDDENRMTFPNDK
FYFKKPAEMFRLFPSLSEIYQNTVDLAERSEVKLDFNTFYLPDYPDAGGKEAAAKLLRRK
CQDGLLDKGLADNKVAQERLEYELKVIEEMGYVSYFLIVWDFVDYAVRNDIRVGPGRGSA
AGSLVSYLLGITRINPLEYNLIFERFLNPERVTMPDIDIDFDERRDEIIEYVRERYGDEK
VAQIGTFGTMAARAAIRDVGRVLNIPLKRVDRVAKMVPSRPGISLDEALKMNEKLLNYYQ
SDQEIARLVDFARGVEGLPRHISTHAAGIIIGSRDLSELIPLQTQDEAVITQLPMNDLES
LGLLKMDFLGLRNLTIINKALDNIKVNCGHDIVVEQIPLDDPAVYQLLQQGRTLGVFQME
SYLFQDLNQRLKPDRFSDLIAILALGRPGPLGSGLVDQYIDSRHGLRKPEYLHSSLEPIL
KETFGLILYQEQVMEIASKIAGYTMGEADLLRRGMGKKKKELIANERAKFVRGAEELRDI
KQDIANKIFDQMEYFAGYGFNKSHSAAYAMLAYQTAYLKEKHPAEFMAAVLSSVMSNLDK
VGQYIRECKEMGIAVLPPDINKSHYEFRAMSDGKIHFGLKAIKNVGTAAIKAIIEGRQSE
PYHSLEDFLKRVELRPLNIQIIESLIKAGAFSSFEEKRSQILIKFEEIYEKVSSGRRHHS
TGQTSFFDVVANKEDFFEDSIKYPDIAELSLEEKLAQEREYLGIYLSAHPLDRFQKKIAC
FTNCDSQFIKDVDSEENTAQKVLVAGMVIEKKEHITRRKQQMAFLTIEDWAGKIEVIVFP
GVYRDNADFLEKGKKVLIMGRLDEGKVLADRVLSLEIPYLMIELTSKESLKEIKEILQKY
KGDNPVFFRVDRGDYADLILSNRRYWIGDSSKVLQAFEPLKEIEIKIFD
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgacagctaactttgttcacttacacgtccatactgaatatagtcttctggacggagct
ctgcgcatcaaggaccttgttcagtatagtaaagagctggctatgccggcagtggctatg
accgatcatggggttttatatggtgcagtagacttttaccggcaggctgttcgggaaggt
attaaaccaattatcggttgtgaggtttatttagcccctggttctagatttgagaagagt
aagagagagagataccatttggtattactggctatggataatgagggttaccataatctg
ataaaattggtatcacaagcctggctggaaggtttttattataagccgagggtagataag
gatttattatacgaacatcacaagggactggttgctctatcggcctgtgttcagggtgaa
ataccacaattgattttaaagggaaaagaggaaaaggccagagaaacatccctggaatat
agggagatatttggtaaaggtaatttctattttgaattacaggaccaccacctgggagat
gaaaaaaaggttaatagtcatttgattaaactgggtaaggagcttaatattccactactg
gttactaatgatgtacactacttaaaacaaagtgatgctgaactccatgatgttttgctg
gcaatgcagacaggtaagacagtagatgatgaaaatagaatgacctttcctaatgataaa
ttttattttaagaaacctgctgaaatgttcaggctttttccatcactgtcagaaatttac
cagaatacagttgatttagcagaacgtagtgaagtaaaacttgactttaataccttttat
ctgcctgattaccctgatgccgggggtaaagaggctgcagcaaaattgttgagaagaaag
tgtcaggatggtctacttgataaaggactggctgataataaagtagcccaggaaaggctt
gagtatgaattaaaggtaattgaagagatgggttatgtctcttatttcttgattgtctgg
gattttgttgactatgctgttagaaatgatattagagtaggtccgggtaggggttcagca
gccgggagtctggtttcgtatctcctggggataacccgtattaatcccttggagtataat
cttatttttgagaggtttttaaaccctgaaagggtaaccatgcctgatattgatatagat
tttgatgaacgaagggatgagataatagaatatgtacgggaaaggtatggagatgagaaa
gttgcccagattgggacttttgggactatggcagccagggccgctatccgtgatgtggga
cgtgttttaaatataccattaaaaagagttgatcgggttgctaaaatggtgccgtcaagg
ccgggtattagtctggatgaagccctgaagatgaatgaaaagctattaaattattatcaa
agtgatcaagaaattgcccgcttggtggattttgctagaggtgttgagggattaccaaga
catatttccacacatgcagcaggtattattatcggctccagggatttaagtgaattaata
ccacttcagacccaggatgaagctgtcataacccagcttcccatgaatgacctggagagt
cttggtttattgaaaatggatttcctgggtttaaggaatcttactattattaataaggct
ctggataatatcaaagtaaactgtggccatgatatagtggttgagcagataccattagat
gacccggctgtttatcaactattacagcagggcagaaccttaggggtctttcagatggaa
tcctacctctttcaggaccttaaccagcgcttaaaaccagataggttctctgatttaatt
gccatccttgcattaggacgtccaggaccacttggtagtggtcttgttgatcagtatatt
gatagtagacatggtttaagaaaaccagaatacctccattcatcacttgaaccaatactt
aaggaaacatttggtttaatactctatcaggaacaggtgatggagattgccagtaagatt
gctggctacacaatgggtgaagctgatctattgagaaggggtatgggtaaaaagaaaaaa
gaactgattgctaatgagcgggcaaagtttgtcaggggtgctgaagaattaagggatatt
aagcaggatattgccaataaaatctttgatcagatggaatattttgcaggatatggtttt
aataaatcacatagtgctgcctatgctatgctggcctatcagactgcttatcttaaagaa
aagcatccagcagaatttatggctgcagttttatcatctgtgatgagcaacctggataag
gttggacagtatattcgtgaatgtaaagaaatggggattgcggttttaccccctgatatt
aataaaagccactatgaattcagggcaatgtcagatgggaagatccactttggtttaaag
gctattaaaaatgtaggaactgcagcgatcaaggccattattgaaggcaggcagtcagaa
ccctatcattcacttgaggattttctcaaaagagttgaacttagacctcttaatatccag
attattgaatcattgatcaaggcaggtgctttttcatcctttgaagaaaagaggtctcag
attttaatcaagtttgaggaaatctatgagaaggtaagttccgggcgccgtcatcacagc
acaggacagacctcgttttttgatgtagttgctaataaagaggatttttttgaagatagt
attaaatacccggatattgcggagctttccctggaagagaaactggcccaggaacgggaa
tatctgggaatatatctttcggcacacccccttgacaggttccaaaaaaagatagcttgt
tttactaattgtgatagccagtttatcaaagatgttgatagtgaagaaaatactgctcaa
aaggtacttgtggcagggatggttattgaaaaaaaagaacatatcacccgacgtaagcaa
cagatggcttttttgacaatagaagactgggctggtaagatagaggtaattgtcttcccg
ggtgtttacagggataacgctgatttcctggaaaaaggcaagaaggttttgataatgggc
agactggatgagggtaaggtcctggctgatagggttctttctcttgagataccttacctt
atgatagaattgaccagtaaagaaagtcttaaagaaataaaagagattcttcagaaatat
aaaggagataatcctgtttttttcagggtagatagaggggattatgctgatttaatactc
agtaataggagatactggataggagatagtagtaaagtgctgcaggcttttgagccttta
aaggaaatagaaataaaaatatttgattaa
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