Iocasia frigidifontis: GM661_15590
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Entry
GM661_15590 CDS
T07718
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ifn
Iocasia frigidifontis
Pathway
ifn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ifn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GM661_15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifn03021
]
GM661_15590
03400 DNA repair and recombination proteins [BR:
ifn03400
]
GM661_15590
Enzymes [BR:
ifn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GM661_15590
Transcription machinery [BR:
ifn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GM661_15590
DNA repair and recombination proteins [BR:
ifn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GM661_15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
AMIN-like
CTD12
Motif
Other DBs
NCBI-ProteinID:
QTL99273
UniProt:
A0A8A7KBP8
LinkDB
All DBs
Position
complement(3260938..3261882)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRVEIVESDKKVGKFEVAPLERGYGTTLGNSLRRILLSSLPGAAITSVKFDGVR
HEFSTVPGVVEDVSEIILNLKEVVIKYTGNGIEKITLNVEGEGEVTAGDFKTSGDLEIIN
KDHHIATLSEDGSLVLEATVERGRGYVTAEENQEHFDKIIGLIPIDSSFSPIERANFKVE
NTRVGQVTDYDRLVLEVITNGSISPEDAVSLSSKIMTEHLELFINLTDEVNDVEIMVEKE
EEEKDKIFDTTIEELELSVRSSNCLKRAGINTVGELTSKTEDDLMKVRNLGKKSLLEIKE
KLTELELDLKEPEI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatagaaaagcctcgtgtagagatagttgaaagtgacaaaaaggtaggtaaa
tttgaggttgctccactggaaaggggttatggtactacccttggcaattccttgagaaga
atacttctttcttctctccctggagcagctattacatcagtaaagtttgatggagtgaga
catgaattttctactgtaccaggtgtagtagaagatgtatcagaaataatccttaattta
aaagaggttgttattaagtatactggtaatgggattgagaaaatcacccttaatgtagag
ggtgagggtgaggttactgccggtgattttaaaacatctggtgatctggagataattaat
aaggatcatcatattgctaccttatctgaagatggcagtttagtcctggaagctactgtt
gaaaggggtagggggtatgttactgctgaggagaatcaggaacattttgataaaattatt
ggcctgattcctattgattcctctttcagtccaattgaaagagctaattttaaggttgaa
aataccagggttggtcaggtgactgattacgatagactggtattagaggtgatcaccaat
ggcagtatttcacctgaagatgcagtaagtctttcttctaaaattatgactgaacatctt
gaactctttattaatttgacagatgaagtaaatgatgttgaaataatggtagaaaaagaa
gaagaagaaaaggataagatttttgatactactattgaagaacttgaattatctgttcgt
tcttctaattgtcttaaacgtgctggtattaacacagtaggggaattgaccagtaagaca
gaagatgacctgatgaaggttagaaatcttggaaaaaaatcattactggagattaaagaa
aaattaacagagcttgaactagatttaaaggaaccagaaatttaa
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