Isorropodon fossajaponicum endosymbiont: CVFO_0879
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Entry
CVFO_0879 CDS
T07680
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Pathway
ifo03030
DNA replication
ifo03430
Mismatch repair
ifo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVFO_0879 (dnaQ)
03430 Mismatch repair
CVFO_0879 (dnaQ)
03440 Homologous recombination
CVFO_0879 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifo03032
]
CVFO_0879 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ifo03400
]
CVFO_0879 (dnaQ)
Enzymes [BR:
ifo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVFO_0879 (dnaQ)
DNA replication proteins [BR:
ifo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVFO_0879 (dnaQ)
DNA repair and recombination proteins [BR:
ifo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVFO_0879 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF5881
Amidohydro_3
Motif
Other DBs
NCBI-ProteinID:
BBB24049
LinkDB
All DBs
Position
800106..800777
Genome browser
AA seq
223 aa
AA seq
DB search
MERLIVLDTETTGIEPSEGHRIIEIGCTEIVDRQITENNEYHEYIQPSRNVGDSVRIHGI
TDKFLTKKPKFEAIVKTFLTYIEGATLIIHNAPFDLGFLNHELKLMGIDERIEDKCNIID
SLELSKQQRPDTLHNLDALCRRFEIDSSARTVHGALLDAKILAQVYLAMTGGQSTLFGNE
QVANEQANNTNNIIRVERAIGKIKVVYANKQELTAHASYFEKI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactaattgtactggacactgaaactacaggcattgagccttccgaaggtcat
cgcatcattgaaattggttgtacagaaattgtagatagacaaatcactgagaataatgaa
tatcatgaatatatacaacccagtcgcaatgttggcgattcggtgcgaattcatggtatt
actgacaagttcttaacaaaaaagcctaaatttgaagccattgttaaaacgtttctaacc
tatattgaaggtgcaacactcatcattcacaacgccccatttgaccttgggtttttaaac
catgaacttaaacttatgggtattgatgagcgtattgaggataaatgcaatattatcgat
tcattagaactatctaaacaacaacgacctgacacattgcacaatcttgacgccttatgc
cgacgatttgaaattgactcaagtgcaagaactgtacatggcgcactactagatgcgaaa
attctagcacaagtttatctagcaatgactggcgggcaatcgactttatttggcaatgaa
caagtggccaacgagcaagccaataatactaataacattattcgagtagaacgcgctatt
ggcaaaatcaaagttgtttatgcaaataaacaagaactaacagcacacgctagttacttt
gaaaaaatttaa
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