Isorropodon fossajaponicum endosymbiont: CVFO_0925
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Entry
CVFO_0925 CDS
T07680
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Pathway
ifo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVFO_0925 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifo03400
]
CVFO_0925 (uvrB)
DNA repair and recombination proteins [BR:
ifo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVFO_0925 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CVFO_0925 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
AAA_30
Orbi_NS3
Kinesin
P-loop_SecA
DUF8810
tRNA-synt_His
Motif
Other DBs
NCBI-ProteinID:
BBB24084
LinkDB
All DBs
Position
complement(841437..843434)
Genome browser
AA seq
665 aa
AA seq
DB search
MDNKFQLISKFSPSGDQPEAIKTLVDGVNAGAKFQTLLGVTGSGKTFTLANVIQQTKRPS
LIMAPNKTLAAQLYSEMKEFFPHNSVEYFVSYYDYYQPEAYVPASDTYIEKDSSINEQIK
QMRLSATKALLERDDVIIIASVSAIYGLGNPESYMAMLLHLSVGEITNQREILSRLSQMQ
YSRSNATLIRGHFQVKGEVIDIFPADSEEQAIRIEMFDEEIEQLYWFDPLTGEKLKSLQR
ITIYPQTHYVTPKSKILNMLDDIKAELKDRRSELLSVNKLVEEQRLTQRVHMDIEMMREL
GYCTGIENYSRYLSNQNPGEPPSTLLDYLPDNALVILDESHVTVSQIGGMYKGDRARKKT
LVEFGFRLPSALDNRPLKFSEFEDRVHQCILVSATPAQYELEVSSVIAEQVVRPTGLLDP
EIDIRPVDTQVDDLLSEIRMRVKAGERVLVTTLTKKMSEQLSDYLNDHHVKVRYLHSDID
TVERVEIIRDLRLGIFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNINGHVILYVARITKSMQKAMDETKRRRIKQQAYNLKNNITPKGIDKPIINILDTDL
TSNQIEEDGTQKVFTQLLPVQLAKEIKILEKKMYGFASDLAFERAADVRNQIKQLKDTQF
KKHYD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtggacaataaatttcaactgatatcgaaattttcccctagtggggatcagccagaagcg
attaaaactttggttgatggtgtgaatgctggtgctaagtttcaaactttgcttggcgta
actggctcgggtaaaacctttacattggccaatgttattcaacagactaagcgccccagt
ttgattatggcacccaataaaacattagcagcacaattgtatagtgagatgaaggagttt
tttccacacaattcagtggaatattttgtttcttattatgattattatcagccagaagct
tatgtacccgcctctgatacttatatcgaaaaagactcttctattaatgagcaaattaag
caaatgcgcctatctgccactaaggcgttattagagcgtgatgatgttattattattgct
agtgtgtctgctatttatggcctgggcaaccctgaaagttatatggccatgttgctgcat
ttgagtgtcggggaaattactaatcagcgtgagatactttcacgtttgtcgcaaatgcaa
tattcgcgtagtaatgctactttaatacgtggtcattttcaagttaaaggtgaagtgatt
gatatttttcctgctgattctgaagaacaagccatacgcattgaaatgtttgatgaagaa
attgaacaactttattggtttgatcctttaacaggggaaaaactaaagtctttgcaaaga
attaccatctatccacaaacacactacgttacaccaaaatctaaaattttgaatatgtta
gatgatattaaagcagaactaaaagatcgcagaagtgagttattgtctgtgaataaatta
gttgaggaacagcgcttaacacaacgcgtacatatggatatcgaaatgatgcgcgagtta
ggatactgcacaggtattgagaattactcgcgctatttatccaatcaaaaccctggcgag
ccaccctcaacattgttggattatttgcccgataatgcattggtaattttagatgaatcg
catgtgactgttagccaaattggtggtatgtataaaggtgatagggcacgcaaaaaaacg
cttgttgagtttggttttcgcctaccaagtgcgttggataatcgaccacttaaattttca
gaatttgaagacagagttcatcaatgtatcttggtgtctgccacgcctgcacaatatgag
ttggaagtttctagtgtgattgctgaacaagtagtaaggccaacaggattgttagaccct
gagattgacattcgacctgtggatactcaggtggatgatttactgagtgaaatacgtatg
cgcgttaaagcgggcgaacgcgtattggtgacaactttgaccaaaaaaatgagtgagcag
ttaagtgattacttaaacgaccatcatgttaaagttcgttacttacattctgatattgat
acggttgaaagggtggaaattattcgcgatttgcgcttaggtatatttgatgttctggtt
ggtattaatctattacgtgaaggtttggatattcctgaggtgtctttggtggctatttta
gatgcggataaagaaggttttttacgctctgaacgctcattaattcaaaccatggggcga
gcagctagaaatataaatggacacgtcattttatacgttgctcgcataaccaaatcgatg
caaaaagcgatggatgaaaccaaaagacgtcggattaaacagcaagcttataatttgaaa
aacaacatcactcctaaaggcattgataagcctattattaatatccttgatacagattta
accagtaaccagatcgaggaagatggtactcagaaagtgtttacccaacttttacccgtg
caattagcaaaagaaattaaaatattagaaaagaaaatgtatggttttgctagcgatttg
gcgtttgagcgtgcagcagatgtgcgtaatcagattaaacagctcaaagacactcaattt
aaaaagcattatgattaa
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