Isorropodon fossajaponicum endosymbiont: CVFO_1002
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Entry
CVFO_1002 CDS
T07680
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Pathway
ifo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVFO_1002 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifo03400
]
CVFO_1002 (ung)
Enzymes [BR:
ifo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CVFO_1002 (ung)
DNA repair and recombination proteins [BR:
ifo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVFO_1002 (ung)
Prokaryotic type
CVFO_1002 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
IL10
DUF5999
Motif
Other DBs
NCBI-ProteinID:
BBB24148
UniProt:
A0A7R6PIM6
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All DBs
Position
916617..917276
Genome browser
AA seq
219 aa
AA seq
DB search
MNIQNWHPSIKTLLETQSMVDLKRFLQQQKQAKKVIFPHSKNWFKAFELTAFDKVKVIIL
GQDPYHGLGQAHGLSFSVVQGVKKPPSLGNIFKELHGDLNIKPSQSGDLTHWATQGVLLL
NSVLTVEAHQAASHANQGWEVFADGIIKTLSEQRQHLVFMLWGAYAQKKATFIDKDKHLI
LTTTHPSPLSAHRGFLGCRHFSKANDYLKMHNQQVINWS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacaaaactggcacccaagtatcaaaacattgcttgaaacacaatcaatggtt
gatttaaaacgatttttacaacagcaaaaacaagctaaaaaagttattttcccccattct
aaaaactggtttaaagcctttgaattaactgcatttgataaagttaaagtcattattctt
gggcaagatccttatcatggattagggcaggctcatggtttgagtttttcagtcgtccaa
ggcgtaaaaaagccaccatctcttggtaatatctttaaagaattacatggtgatttaaac
attaaacctagccaaagtggtgatttaacacactgggcaacacaaggtgttttactactt
aatagtgttttgactgttgaagctcatcaggcagcttctcatgccaaccaaggctgggaa
gtatttgccgatggcattattaaaactctaagcgaacaaaggcaacatttagtatttatg
ctttggggtgcttatgcacagaaaaaagcgacatttattgataaagataagcacttaatc
cttactaccacgcacccctctcctttatcagcacatcgtggttttttagggtgtcggcat
ttttcaaaagccaatgattatcttaaaatgcacaatcaacaagtgattaactggtcataa
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