Isorropodon fossajaponicum endosymbiont: CVFO_1017
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Entry
CVFO_1017 CDS
T07680
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Pathway
ifo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVFO_1017 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifo03019
]
CVFO_1017 (pcnB)
Enzymes [BR:
ifo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CVFO_1017 (pcnB)
Messenger RNA biogenesis [BR:
ifo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CVFO_1017 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
UcrQ
Motif
Other DBs
NCBI-ProteinID:
BBB24160
UniProt:
A0A7R6SQI2
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All DBs
Position
complement(931126..932265)
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AA seq
379 aa
AA seq
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MKAIRQSIKFDKKLLDKDALKVINVINKAGFKAYLVGGCVRDLLLNLEPKDFDIATNAKP
EQVHKLFKRSRLIGRRFRLVHVMFSARKFIEVATFRSGKIQTAKNGVVIRDNCYGNIEDD
VVRRDFNINALYYDIKTQEVIDYVGGLEDIKAKEVHIIGNPGIRFEQDPVRMIRAIRFQT
KLGFQLSDEIKSAIFEQASLIGNISAARLYEECIKLFHNEYGFEVYERLEKYGLLKYLFK
QTHKNEFIKKALLNTSDRIKKNQSVTPVFLFAVFLWQTYNERFIALKNKQSCSSLAMTQA
SEEVIINQIKQVSLPRWLSTRIKDIWLMQPRLEKMQPKKVKTLLSNPRFRMAYDFLLLRS
MSTNSELVDVAKFWTKAQQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccattcgtcaaagcattaagtttgataaaaaacttctagacaaggatgcttta
aaagttattaatgttattaataaagcgggatttaaagcctatttagtgggtggttgcgtt
agagatttgctcttaaatttagagccaaaagattttgatattgcaaccaatgccaaacca
gaacaagtgcataaattatttaaacgctcacgtttaattggtaggcgctttcgtttagtg
cacgttatgttttcagcgcgtaaatttattgaagtggctacttttaggtcaggcaagata
caaaccgctaaaaatggtgttgttattcgtgataattgctatggtaatattgaggacgat
gtcgtgcgtagggattttaatattaacgcgctttattatgatattaaaacacaagaagtg
attgattatgtgggtggacttgaagatataaaagcgaaagaagtgcatattattggtaat
ccaggtataaggtttgaacaagacccagtgcgcatgattagagccattaggtttcaaact
aaattagggtttcaactgagtgatgagattaaatcggctatttttgaacaagcatcactt
attggtaatatttctgcagcacgcctgtatgaagagtgtattaaattgtttcacaatgaa
tatgggtttgaagtgtatgagcgcttagaaaaatatggtttgttaaaatatttgtttaaa
caaactcataagaatgaatttattaaaaaagccttgttaaatacatcagatagaattaaa
aaaaatcaatctgtcacacctgtgtttttatttgctgtatttttatggcagacctacaat
gagcgttttattgcgcttaaaaacaaacaaagttgttcgtctttagcgatgactcaggct
tctgaagaggtgattattaatcaaattaagcaagtctcgttacccagatggttaagtact
agaattaaagatatttggctaatgcaaccaagattggaaaaaatgcaaccaaaaaaagtc
aaaacattattaagcaatccacgttttagaatggcatacgatttcttattattgcgctct
atgagtaccaattcagaattggttgatgtggctaaattttggaccaaagctcaacagtga
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