Isorropodon fossajaponicum endosymbiont: CVFO_1162
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Entry
CVFO_1162 CDS
T07680
Symbol
truA
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifo03016
]
CVFO_1162 (truA)
Enzymes [BR:
ifo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CVFO_1162 (truA)
Transfer RNA biogenesis [BR:
ifo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVFO_1162 (truA)
Prokaryotic type
CVFO_1162 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3969
Motif
Other DBs
NCBI-ProteinID:
BBB24272
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All DBs
Position
1070432..1071175
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AA seq
247 aa
AA seq
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MKIALGVAYLGTNFHGWQCQKPNIRTVQQVVEQALSSVANHPVKVFCSGRTDAGVHATCQ
VIHFETNIKRENKAWLFGGNVNLPSDVNFTWAKHVDDNFHARFSATARQYNYKIHNTKIR
CAIITAHSLWESRKLDIMAMDKASKYLIGEHDFSAFRGSLCQAKSSIKTIEFIKLTKCDD
NILLDIKSSAFLHHMVRNIVGTLLKVGKGEKPIEWVKEVLDSKQRQQAGPTAPPQGLYFI
KTFYPNL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcattaggtgttgcatacttaggcacaaacttccacggctggcagtgtcaa
aaacctaacattcgcactgtgcagcaagtggttgaacaagccctatcaagcgttgccaat
caccctgttaaggtgttttgttctggtagaaccgatgcaggcgtgcatgccacttgccaa
gttattcattttgaaaccaacattaaacgtgaaaataaggcttggctatttggtggcaat
gttaacctaccaagcgatgttaatttcacttgggcaaaacacgttgatgataatttccac
gcacgatttagtgccactgctagacaatacaactacaaaatacacaacacaaaaattcgc
tgcgccatcataacagcccattcattatgggagtcaagaaagctggacataatggcaatg
gacaaagccagcaaatatttgattggtgaacatgacttttcagccttccgaggaagtttg
tgtcaagcaaaatcctccattaaaaccattgaatttataaaactaaccaagtgtgatgac
aacattttactagacataaagtccagcgcctttttacaccacatggtgcgcaatattgtt
ggtacactgctcaaagtaggcaaaggcgaaaaacctattgaatgggtcaaggaggtgctg
gatagtaagcaacgccagcaagctggccccaccgccccaccccaagggctttattttatt
aaaactttttaccctaatttataa
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