Isorropodon fossajaponicum endosymbiont: CVFO_1198
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Entry
CVFO_1198 CDS
T07680
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifo03016
]
CVFO_1198 (rnd)
Enzymes [BR:
ifo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CVFO_1198 (rnd)
Transfer RNA biogenesis [BR:
ifo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CVFO_1198 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
POT1PC
BE_C
Motif
Other DBs
NCBI-ProteinID:
BBB24301
UniProt:
A0A7R6SQN1
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All DBs
Position
1106591..1107637
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AA seq
348 aa
AA seq
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MIQTQTQLSQFLDLIKHETELAIDTEFKRVNTYYPVLCLVQIATKSATDCIDILAIEDLN
PLFEKLYQKDCLWIVHSARQDIEAMYYLSKQLPKCLFDTQIAASLLGHPMQISYQALTQI
LQNVYLEKAYTRLDWTTRPLPDEALEYALDDVRYLLKNFYQLESQLKTEHKSHWIEQEGQ
LLLDIKLYNPDIKNAWKNVKGFSRLAKNTRCLIAQLAAFREHQAIHKNKPRKWIMSDDKL
INYVLKKESLPFGIKTVFNEFLVSNEQLNKAEIIINNKHTLPTKTEKAKKNELQKLIKNI
ANQYNLDDKIIANGKSLLSFIRGDRSVIFLTGWRFNLLKEELEKCKIV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaacacaaacacaactaagtcagtttctagatttaataaaacatgaaaccgaa
ctggccattgacactgaatttaagcgtgtcaatacttactatccagtattatgcttggta
caaatagccactaaaagcgcaactgactgtatcgatatcttagcaattgaagatttaaac
ccactgtttgaaaaactttaccaaaaagactgcttatggattgtacactcagcacgccaa
gacattgaggccatgtactatttgtccaaacaactccctaaatgtttgtttgacactcaa
attgcagctagcttacttggccatcctatgcaaatttcttatcaagcactgactcaaatc
ttgcaaaatgtctatttagaaaaagcttatacccgcctagactggaccacacgtccattg
ccagatgaggcacttgagtatgcgttagatgatgtacgatatttacttaaaaatttctac
caacttgagagccaattaaaaactgagcataaatcacattggattgaacaagagggtcaa
ttattattagacatcaaactttataatcctgatatcaaaaacgcatggaaaaacgtcaaa
ggattttcacgcttagccaaaaacacacgttgtcttatcgcacaattagccgcgtttaga
gaacatcaagcgattcataagaacaaacctagaaaatggataatgagtgatgataaatta
atcaactatgtgctcaaaaaagaatcattaccctttggtataaaaactgtatttaatgaa
tttttagttagtaatgaacagctgaataaggctgaaattattattaataataagcataca
ctaccaacaaaaaccgaaaaagcaaagaaaaatgaattacaaaaactgataaaaaatata
gcaaatcagtataatctagacgataaaatcattgccaacggcaaatcattattgagtttt
attcgtggtgaccgctcagttattttcttaacaggttggcgctttaatcttttaaaagag
gaattagaaaaatgcaaaatagtttaa
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