Isorropodon fossajaponicum endosymbiont: CVFO_1318
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Entry
CVFO_1318 CDS
T07680
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifo03032
]
CVFO_1318 (topA)
03400 DNA repair and recombination proteins [BR:
ifo03400
]
CVFO_1318 (topA)
Enzymes [BR:
ifo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CVFO_1318 (topA)
DNA replication proteins [BR:
ifo03032
]
Prokaryotic type
DNA Topoisomerases
CVFO_1318 (topA)
DNA repair and recombination proteins [BR:
ifo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVFO_1318 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBB24391
UniProt:
A0A7R6SQR2
LinkDB
All DBs
Position
complement(1210259..1212595)
Genome browser
AA seq
778 aa
AA seq
DB search
MAKNLVIVESPAKAKTIGKFLGKDFSVKSSIGHIRDMPKKNMGIDIENNFIPTYEITTDK
KKVVADLRKAVKVAEKVYLATDEDREGEAIAWHLLEALNLPKDTPRIVFHEITKSAITNA
IVKPRTVDYQLVDAQQARRIIDRLVGFEISPVLWRKISGARSAGRVQSPVMRLVVERERE
ISQHITNSTYKVKAELVSEGGEMSEVKLSKEFESKEQALAFANALLSANLTVASTEKKPS
KRSSKPPFITSTLQQEASQKLGFSVKQTMTLAQNLYREGSITYMRTDSFTLSEIAIEAAG
QVIAKEFGSDYHHIRRYKTKDTGAQEAHEAIRPTDLTKPSIFGIEDQAAKLYSLIYKRTL
ACQMSDAQLQKTQIKINISGLEEKFLANGEILTFPGFLRVYDYLSSEDKLLPDLNKGDIL
SLASFKARESFSRAKPRYTEASLVKKIEEMGIGRPSTFATMVSTVQDRNYVTKETREGVE
RAYQLIEIKDNQVIQSQPSEVTGAEKNKLFPTNVAYLLTDFLVKYFDNIIDYKFTAKLES
DFDTIATQNVPWQGVVKNFYTPFHQKIEDAADISREETHGMRELGTDPKSGKPVSVRFGR
YGAFAQIGHKDDKDKPAFASLRGSLDIESITLDEALELFNMPRTVGETDDFGTIKANYGR
FGPYIQYGKKYVALKEDTPEEVSLEKALELIKAKEKFDAERIIKAFDDSDIQVLNGRFGP
YIWNGKKKSKGQKNITIKKVFGDKAPADLTLEECKKAVTGKLKPKVKKKTVKKKVTKR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatcttgttattgttgagtcccctgccaaagctaaaaccattggaaagttt
ttaggtaaggactttagcgttaaatctagtattggtcacatccgtgacatgcccaagaaa
aacatgggcattgacattgaaaacaattttatccccacctatgaaattaccacggataag
aaaaaagtagtcgctgatttgcgcaaggccgtaaaagtagcagaaaaagtctatctcgca
acggacgaggatcgcgaaggtgaggctattgcttggcatttactagaagcactcaatttg
cccaaagacaccccaagaattgtctttcatgagattaccaaaagtgctattactaacgcc
attgttaagcctagaacggttgattatcagttggtagatgctcaacaagcacgccgcatt
attgacagattggtaggttttgaaatatcgcctgttctatggcgcaagatttcaggcgcg
cgttctgctggcagggtgcaatccccagtgatgcgcctcgtggtcgaaagagagcgagaa
attagccaacatattaccaattctacttacaaagtcaaagcagagttggtgagtgaaggt
ggcgagatgtctgaggttaaactgagcaaagagtttgaatctaaagagcaggcattagcc
tttgctaatgcgcttttatcggctaatttaaccgttgcatcaactgagaaaaaaccctct
aaacgctcatcaaagcccccctttattacctcaaccttgcaacaagaagcctctcaaaaa
ttaggcttttcggttaagcaaaccatgactttggcacaaaatttgtaccgtgaaggctct
attacttacatgcgaactgattcattcacgctgtcagaaatagccattgaggcagccggt
caagtcattgcaaaagaatttggcagtgactatcaccacataagacgatataaaaccaaa
gatacaggtgcacaagaagcgcatgaggcaattcgcccaactgatttaaccaagcctagt
atttttggtattgaagatcaggctgctaaattatatagccttatttacaaacgcacattg
gcttgccaaatgagcgacgctcaattacaaaaaacccaaataaaaatcaacatttcaggg
cttgaggaaaaattcctagctaatggcgaaatattgacatttccagggtttttaagagtt
tatgattatctatcgtcagaggataaattattgcccgatttaaacaaaggcgatatattg
agtttggctagttttaaagccagagagagcttttcaagagctaaacctcgctacactgaa
gcttcgctagtgaaaaaaattgaggaaatgggtatcggtaggccttcaacattcgccact
atggtatcgacagtgcaagacagaaattacgtcacaaaagagaccagagaaggtgttgaa
cgtgcgtatcaactgattgaaatcaaagacaaccaggtcattcaatcacagccaagcgaa
gtaacaggcgctgaaaaaaacaaattgttcccaaccaatgttgcctatttactcaccgat
tttctagtcaaatattttgacaacatcattgattataaattcactgccaaacttgaaagt
gattttgacaccattgccacacaaaatgtcccgtggcaaggcgtagttaagaatttttac
accccttttcatcaaaaaattgaagacgctgctgacatttccagagaagaaacccacggc
atgcgcgaactcggcacagacccaaaaagtggcaaacctgttagcgtgcgtttcggcaga
tacggtgcttttgcccaaatcggccataaagacgacaaagacaagccagcctttgcctca
ctcagaggctcattagacattgaaagcattactcttgatgaggctttagaattatttaac
atgcctcgcaccgtcggcgagactgatgattttggcaccattaaagccaactatggtcgc
tttggtccctatatccaatatggcaagaaatacgtcgcactcaaggaagataccccagaa
gaagtcagcttagaaaaagcactagaactcattaaagctaaagaaaaattcgacgccgaa
cgcatcatcaaagccttcgatgactccgacatccaagtcctcaacggccgttttggcccc
tacatttggaacggcaagaaaaaaagcaaaggtcaaaaaaacatcaccatcaaaaaagtc
ttcggcgataaagccccggcagacctaactcttgaagaatgtaaaaaagcggttactgga
aaactcaagcctaaagtcaaaaagaagacagttaagaaaaaagttaccaaaaggtag
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