Isorropodon fossajaponicum endosymbiont: CVFO_1340
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Entry
CVFO_1340 CDS
T07680
Symbol
recN
Name
(GenBank) DNA repair protein RecN (Recombination protein N)
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifo03400
]
CVFO_1340 (recN)
DNA repair and recombination proteins [BR:
ifo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CVFO_1340 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
CVFO_1340 (recN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
nSTAND3
AAA_22
HIP1_clath_bdg
AAA_15
ACOX_C_alpha1
AAA_16
RsgA_GTPase
NTPase_P4
NACHT
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBB24410
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Position
complement(1228231..1229892)
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AA seq
553 aa
AA seq
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MLSQLSVKNLAVVEALDLSFKQGMSVVTGETGAGKSILLQALNLALGGRGDATLVRLGAD
KAEISASFDVAHYPKIQNYLQVHSLEDEGECILRRVLNADGRSRAFVSGINVPLSVMRGV
GELLVDMHGQNEHQLLLRPNQQRQLLDTYADTQALCTSLNVVVNAHKQVSEQIENLNNNH
QMKLQQQELLTHQLKELNDAVLSEQELTTIEAEFKTSANSAALIEKVSGVLNQLENETGI
NTQLLSINHALSEALDMDKALVQAVELLSNAQLQAQEGIYELTHYLNSLSVDDETVKTLE
ARLGELHDLARKHSCQIPELLTIKNNIELQLDEIGTGTHSLDELVHQKNQLQADYQEKAV
QLSKIRISKAYELSNLVTQTMQVLGMPGSEFSSALPSKPDGVHLNGAESVDFLVKTSMGQ
DFKPLKKVASGGELSRISLAISVIGSDSEYTPTLIFDEVDVGISGAVAEVVGKKLKQLSG
YYQVICITHLAQVAAFGHQHLRVQKSQDKDGAQTTVTQLSSNERVDEIARILGGATITEK
ARNAAAEMIGMSI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcaattaagtgttaaaaatttagcagttgttgaagcgctagacttgtctttt
aagcaaggcatgagcgttgttacaggtgaaacaggcgcaggaaaatccattcttttgcaa
gcccttaacttggcattgggtggtcgtggcgatgctaccttggtacgtcttggtgcagat
aaagctgaaattagtgccagttttgatgtggctcattatccaaaaattcaaaactatctt
caagtgcactcactagaagatgagggtgagtgtattttgcgtagagtactgaatgctgat
ggtcgctcaagagcatttgtcagtggcattaatgtgcctttgtcagtaatgcgcggtgtc
ggtgagttgttggttgatatgcatggtcagaatgagcaccaacttttattgcgtcccaat
caacagcggcaattattggatacgtacgctgatacgcaagcactttgcacctcgcttaat
gtggtagtaaatgcacacaaacaagtgagtgagcaaattgagaatttgaataataaccat
caaatgaagctgcaacaacaagaactactcactcaccaactcaaagaattaaatgatgca
gtattaagcgaacaagagttaactacgattgaggctgaatttaagaccagtgcaaatagt
gcagcgttaattgagaaagtctcaggtgtattaaatcagcttgaaaacgaaacaggcatt
aatacccagctattaagtattaatcatgccttatctgaggcgctagacatggacaaggcg
ctagtccaagctgtagaattactctcaaatgctcagttgcaagcccaagagggtatttat
gaacttacccattatttgaacagtttatctgttgatgatgaaaccgttaaaacgctagag
gcacgtcttggtgagttgcatgatttggccagaaagcatagctgtcaaattcctgaatta
ttaaccatcaaaaataatattgagttgcaattggacgagataggcactggcactcattcg
cttgatgaacttgtccatcaaaaaaatcaattgcaagcagactatcaagaaaaagcagtg
caattaagcaaaattagaatcagcaaggcgtatgagttatcaaacttagtcacacaaacc
atgcaagtattgggcatgcctggtagtgagttttcatctgctttaccctccaagcctgat
ggcgtgcatttaaatggtgcagagtcggttgattttttagtcaaaaccagtatgggacaa
gattttaagcctttaaaaaaagtcgcctcaggcggtgaattgtcacgaatttcattagcc
atttcagtgattggtagtgacagcgaatacactcctactttgatttttgatgaggtagat
gttggcatcagcggtgcagtagccgaagtcgttgggaaaaaacttaaacaattaagcggg
tattatcaagtcatttgcattactcatttagcacaagttgctgcttttggtcatcaacat
ttgcgtgtgcaaaagtcacaagataaagacggtgcacaaaccacagtaacacagttatct
agcaatgaacgtgtggatgagattgcccgtattttagggggtgcaactatcaccgagaaa
gctagaaatgctgctgcagaaatgattggaatgagtatttaa
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