Isorropodon fossajaponicum endosymbiont: CVFO_1593
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Entry
CVFO_1593 CDS
T07680
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ifo
Isorropodon fossajaponicum endosymbiont
Pathway
ifo03030
DNA replication
ifo03430
Mismatch repair
ifo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVFO_1593 (holA)
03430 Mismatch repair
CVFO_1593 (holA)
03440 Homologous recombination
CVFO_1593 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifo03032
]
CVFO_1593 (holA)
03400 DNA repair and recombination proteins [BR:
ifo03400
]
CVFO_1593 (holA)
Enzymes [BR:
ifo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVFO_1593 (holA)
DNA replication proteins [BR:
ifo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVFO_1593 (holA)
DNA repair and recombination proteins [BR:
ifo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVFO_1593 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
BBB24597
UniProt:
A0A7R6PDX6
LinkDB
All DBs
Position
1437633..1438652
Genome browser
AA seq
339 aa
AA seq
DB search
MKIKPQQLNTQLANKLNAIYFVFGAEILLIEQSLTQINKTAKQAGFDEKVSFEIDANFDW
NQIFGEISAASLFSPKRIIKCRLETGKIGIKGAKALAEIASTLPNDILLIVSTGKLDMAQ
QKSKWFKTLEQFGSVVQHFEVQSNHLVGWIANHMAELGLEANTEIAQSIAFCTEGNLTAS
MQEIQKLKIAYPNGKINTQEYLEQANQQSKYTVYGLIDAALFGNSNQVNKIYQTLVSDTA
MPIQLSSSLYREIKSVIEMSVELRQVKDINTVLQNHRVWNKRKPVITSVLKRHPYQRLQK
LLLSLGRIDRSIKGMDSLNVIDELHTLLLSLAGKTQWTQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaccgcagcaactcaacactcaattagccaataaacttaatgctatttat
tttgtttttggtgccgaaatattactcattgagcaaagtctaacgcaaataaacaaaaca
gcaaaacaagctggatttgacgaaaaagtaagctttgaaattgatgctaattttgattgg
aatcaaatctttggagaaatctcagctgcctcgcttttttcaccaaaacgcattattaaa
tgccggttagaaacagggaaaatcggcattaaaggcgccaaggcattggctgaaattgcc
agtaccctgcctaatgatattttattgattgtttccactggcaaactggacatggcacag
caaaagagcaaatggtttaaaacactagaacaatttggcagtgttgtccaacattttgaa
gtgcaaagtaatcatttggttggctggattgcaaatcacatggcagaattagggcttgaa
gctaatacagaaattgcacaaagtattgctttttgcacagaaggcaatttgaccgcttct
atgcaagaaattcaaaaactaaaaatagcctatccaaatggcaaaatcaacacacaagaa
tatcttgaacaagccaatcagcaatctaaatacaccgtttatggcctgattgatgccgct
ttatttggcaatagtaatcaggttaataaaatttatcaaaccttagtctctgatacggct
atgccaattcaactgagtagttccttgtatcgagaaattaaatcagtcatcgaaatgtca
gttgaacttagacaggtgaaagacattaatacagtcttgcaaaatcatcgagtttggaac
aaaagaaaacccgttattactagtgtattaaaacgtcacccttatcagcgtttacaaaaa
ttattattatcactagggcgtattgaccgctcaattaaaggtatggatagtcttaatgtc
attgatgaattacacacattattactaagtttggctgggaaaacacaatggactcaataa
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