Ictalurus furcatus (blue catfish): 128598901
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Entry
128598901 CDS
T09387
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
ifu03015
mRNA surveillance pathway
ifu03040
Spliceosome
ifu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128598901 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
128598901 (alyref)
03015 mRNA surveillance pathway
128598901 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128598901 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128598901 (alyref)
03041 Spliceosome [BR:
ifu03041
]
128598901 (alyref)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128598901 (alyref)
TREX complex
128598901 (alyref)
Spliceosome [BR:
ifu03041
]
Complex C
Other components
EJC/TREX
128598901 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128598901 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
128598901
NCBI-ProteinID:
XP_053466087
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All DBs
Position
2:24347489..24350704
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AA seq
283 aa
AA seq
DB search
MVDKMDMSLDDIIKQSKQQRGGAGGRGGRGGRGRGGAGRGAGGAGRLGANAGGSFGVRGG
GSGPMRNRQNLSRGRSRPTPYSRPKQLPDKWQHDLFDNGYSTNSGGGGGGGGGGGVGVET
GGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMK
QYNGVPLDAFDSVPGRPMNIQLVTSQIDAQRRAPMQGLNRGGSGGMNRNKMGSFGGMQRG
RGGRGGGGLRGRGRGARGNNKQQLSAEELDAQLDAYNARMDTS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggtagacaaaatggatatgtcgttggacgacatcatcaagcagagtaagcagcagaga
ggaggcgcgggcggccgcggtgggagaggaggccgaggccgaggcggcgctggccgcggt
gctggaggcgccgggcggctcggagctaacgcaggcggaagctttggcgtccgcggcgga
ggctcaggccccatgaggaatcgtcagaacctgagccgtggcagaagcagacccacgccg
tacagcaggcccaagcagctccctgacaagtggcagcacgacctgttcgacaatggctac
agcaccaattctggaggtggtggcggcggcggaggaggaggaggagtgggcgtggaaact
ggcgggaagctgcttgtatccaatcttgactttggtgtctccgatgcagacattcaggaa
ctttttgcagaatttggcaccctgaagaaggctgcggtccattacgaccggtccggacgc
agtcttggcacggcagacgtccactttgagaggaaagcagatgctttgaaagccatgaag
caatacaacggtgttcctcttgatgcttttgattctgttccaggtcgcccaatgaacatt
cagctagtcacatcacagattgacgcacagagacgagctccaatgcagggtctgaatcgt
ggtggcagtggaggcatgaacaggaacaagatggggagctttggaggcatgcagagagga
cggggaggacggggaggtggagggctcagaggccgtggcagaggagcaaggggcaataac
aagcagcagctttcagcagaagaattagatgcccagctagatgcctacaatgccaggatg
gacaccagctaa
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