Ictalurus furcatus (blue catfish): 128598988
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Entry
128598988 CDS
T09387
Symbol
tia1l
Name
(RefSeq) cytotoxic granule-associated RNA binding protein 1, like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128598988 (tia1l)
03041 Spliceosome [BR:
ifu03041
]
128598988 (tia1l)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128598988 (tia1l)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128598988 (tia1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_3
XOO_2897-deam
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
128598988
NCBI-ProteinID:
XP_053466230
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All DBs
Position
22:19916894..19927610
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AA seq
346 aa
AA seq
DB search
MMSDDDQPKTLYVGNLSRDVTEALIMQVFTQIGPCKSCKMILDTAGNDPYCFVEFFEHMH
AAAALAAMNGRKILGKDMKVNWASMPSSQKKDTSNHFHVFVGDLSPEISTEDVRAAFAPF
GKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAP
KSNLESQSGTGNTKHLSYEEVLNQSSPSNCTVYCGGVTSGLSDQLMRQTFSPFGQIMEIR
VFPDKGYSFVRFDSHESAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMAMPQQSNP
AYAAQPYGQWGQSYGNGQQMGQYVPNGWQMPTYGVYGQAWNQQGYK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggatgatgaccagcccaagacgttgtacgtcggaaacctctccagggacgtg
acggaggctctcatcatgcaggtgttcacccagatcggaccctgcaagagctgcaaaatg
atcctcgatacggcaggaaacgacccgtactgcttcgtggagttcttcgagcacatgcac
gctgctgctgccctggccgccatgaacggacggaaaatattaggaaaggacatgaaagtg
aactgggcctccatgccgagcagccagaagaaagacacaagcaatcacttccatgtcttt
gtcggcgacctgagcccagaaatctccacagaggacgtcagagccgccttcgctccgttc
ggaaaaatatccgatgctcgtgtggtgaaagatctggctactgggaagtccaaaggctat
ggatttatctccttcattaacaaatgggatgcggagaacgccatccagcagatgaacggc
cagtggctgggaggccggcagatcagaaccaactgggccaccaggaagcctcctgcgccc
aaatccaacctcgagagtcagtccggtacaggcaacaccaaacacctgtcctacgaggag
gtgctgaaccagtcgagccccagtaactgcaccgtgtactgcggaggggtgacctccggc
ctgtcggatcagctgatgaggcagactttctctccgttcgggcagatcatggagatcagg
gtcttcccggataaagggtactcgttcgtgaggttcgattctcacgagagcgcggcccac
gccatagtgtctgtgaatgggacgtgcatcgagggccacacggtgaagtgctactggggt
aaagagaccgcagacatgagggccatgcagcagatggccatgccccagcagagtaacccg
gcctacgcagctcagccgtacggacagtggggtcagtcttacggtaacgggcagcagatg
ggtcagtacgtccctaacggctggcagatgccgacgtacggcgtgtacggtcaggcctgg
aaccagcagggctacaagtaa
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