Ictalurus furcatus (blue catfish): 128599007
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Entry
128599007 CDS
T09387
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04137
Mitophagy - animal
ifu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128599007 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128599007 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128599007 (vcp)
03009 Ribosome biogenesis [BR:
ifu03009
]
128599007 (vcp)
04131 Membrane trafficking [BR:
ifu04131
]
128599007 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128599007 (vcp)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128599007 (vcp)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128599007 (vcp)
Membrane trafficking [BR:
ifu04131
]
SNARE
SNARE associated proteins
Others
128599007 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128599007 (vcp)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128599007 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
128599007
NCBI-ProteinID:
XP_053466276
LinkDB
All DBs
Position
22:14947236..14957755
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDSCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGSAGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPIAKDVDLDFLAKMTNGFSGADLTEVCQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
GGPSQGSAGGTGGNVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatctaaaaatgatgatctttctactgccattctaaaacaaaag
aacagacccaacaggttgatcgttgatgaatccatcaatgaagataacagtgtggtctcg
ctctctcaggccaagatggacgagcttcagcttttcaggggggacactgtgctgctgaag
ggcaagaaaaggagggagacggtttgcatcgtactgtctgacgatagctgctctgatgag
aaagtgcgcatgaacagggtggtgcgcaataacctcagggttcgtctcggagatgtcatc
agcattcagccatgcccagatgtgaagtatgggaaacgcatccatgttctgcccattgat
gacacagtggagggaatcactggcaacttatttgaggtgtacctgaagccttacttccta
gaggcttaccggccaatccgtaaaggtgatatcttccttgtaagaggaggcatgcgtgct
gttgagtttaaagtggtggagactgatcctagcccttactgtatagtggctccagacact
gtcattcactgtgaaggagaacctattaagcgtgaggacgaagaagaatctctgaatgaa
gtcggctacgatgacattggaggtgtgaggaagcagctggctcagatcaaagaaatggtg
gagctgccactcaggcacccagcactcttcaaggccattggcgtgaaacctccccgtggt
attcttctgtacggaccccccggaactggaaaaactctgattgctcgcgctgtcgcaaac
gaaactggagcattcttcttcctgatcaacggccctgaaattatgagtaaactggctggt
gagtctgagagcaacctgcgtaaagcttttgaagaagccgagaaaaacgctcctgccatc
atcttcattgatgaactggatgctattgcacctaagagagagaagactcacggtgaggta
gagaggcgcatcgtgtctcagctgctcaccctgatggatggactgaagcagcgggctcac
gtgatcgtcatggctgccaccaacagacccaacagcattgacccagctctcaggcgattc
ggccgctttgacagagaggtggacattggtattcctgatgccacaggaagactggaaatc
ctgcagatccacactaagaacatgaagctggctgatgatgttgatctggaacaggttgcc
aacgagacccatggtcatgtgggtgctgatttggctgccctgtgctcagaggctgcactg
caggccatccgcaagaagatggacctcattgacctggaggacgagacgattgacgcagag
gtcatgaactccctggctgtcaccatggatgacttcaggtgggccctgagccagagcaac
ccatcggctctgcgcgagactgttgtggaagtgcccaacatcagctgggaggacattggt
ggactggatgatgtcaagagagaactgcaggaactggtgcagtacccagtggagcatcca
gacaaattcctgaagtttggtatgactccatccaagggtgtgttgttctatggtccgcca
ggttgtggtaaaaccctcttggccaaggccattgccaatgagtgccaggccaacttcatt
tccatcaaaggccctgaactgctaaccatgtggtttggagagtctgaggctaatgttcgt
gagatcttcgataaggctcgtcaagctgccccatgcgtgctcttctttgatgagctggac
tccattgctaaagcccgtggtggaagcgcgggtgacggcggtggagcggccgaccgcgtc
ataaaccagatcctgactgagatggacggcatgtccagcaagaagaacgtcttcatcatt
ggcgccaccaacagaccggatataattgaccctgccatcctcaggcctggccgtctggac
cagcttatctacatccctctgcccgatgagaaatcccgcatggccattcttaaagctaac
ctcaggaagtctccaatcgccaaggatgtagacctggacttcctggccaagatgaccaat
ggcttctctggtgctgacttgacagaggtttgccagcgagcctgcaaactggctattcgt
gagtccatcgagaacgagatcaggagggaacgtgagaggcagacgaacccatcagccatg
gaagtggaggaggatgacccagtgcccgagatcaggaaggaccactttgaggaggccatg
cgtttcgcccgtcgctccgtcagtgacaacgacatccgcaaatacgagatgtttgcacag
accctgcagcaaagcagaggcttcggcagtttcagattcccttccagtaatcagggagga
ggtggaccaagccaaggttctgcaggtggcactggagggaatgtcttcaatgaggacaac
gacgatgacctttacggataa
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