Ictalurus furcatus (blue catfish): 128599041
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Entry
128599041 CDS
T09387
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ifu02000
]
128599041 (tmc1)
03037 Cilium and associated proteins [BR:
ifu03037
]
128599041 (tmc1)
Transporters [BR:
ifu02000
]
Other transporters
Pores ion channels [TC:
1
]
128599041 (tmc1)
Cilium and associated proteins [BR:
ifu03037
]
Other cilia and associated proteins
Stereociliary proteins
128599041 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Phage_Gp23
Motif
Other DBs
NCBI-GeneID:
128599041
NCBI-ProteinID:
XP_053466354
LinkDB
All DBs
Position
22:4121436..4143203
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AA seq
926 aa
AA seq
DB search
MHESIFLIFLERTHIHTSTKLPRTTMPREKLITFRSNVSTDVDDGDNSDSIYFVDIDEDR
RRQQGEMDEKKREGKNKADKGQKLQTKSDYLHNSEMTGIKRGGEVEEMPKQRNSSKNKGT
RKQQEVVEEEKWEKKKIKQENNQEDEQSKKMKRKNATDSISEASSSSDEEFEVDSLSEEE
LEKLMEAIDERKKLIATLRTQPWPMHKKMSMLRKWQAFIEKYEGILGKGKGRNLYAHKVK
MMKKWGKFQRHFNNFKKACIPWEMKIKEIESHFGSTVASYFVFLRWLFGINIILFVLSFG
LVMFPEALMGKPYGSIPRKTVSRQEEPTAMNFDVLYDIGGYMKYTVMFYGYYDDQRTIGW
LRYRMPLCYFLVGVCSLAYSYMVVIRTMARNASEECGRDDTNFKYSWQIFTGWDYLIGNP
EAADNKFASITTNFKEVLVDEAELKKYENPRLMLFYRVMCNILVLVILTGSGYIIYYIVR
RSEFFFRDGMDKHSWWERNEVNVVMSLLSTFCPMMFEAITLLENYHPRVSLLFQMGRVFA
LYTGNLYSFLIAVVEQIKLAMVDEEVMKHNLTIWQTNMYNRSIVENSTGSPITVDPADVP
RGPCWETMVGQEFVRMLVVDTLTFYTVLLINDFSRAVVIRFLNDYWCWDLEYTFPCYSLF
DLSGNLLTIIFNQGMVCMGTFYAPCLPILNLIRLQTSMYSQCWAVMSSNIPHTHICKASR
SSNFYMAILLFILFLCTVPLAYTVVTLRPSFDCGPFSGKNRVYDVILEALQMDFPAWTGN
VISYISNPGLVLSFLLLIALTLYYLHTTSKTYKQANNDLKMKLRTQHEENRRRASRLTKK
TAEHLDQDKNMAADEQQDKQSNNHSSLKAKDSRKSSSQSCYLPPPPNIFFGSRGSGLKYS
RNPPYTRPPAPRSHLLHGQLPGVPPY
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaagcatctttcttatttttcttgaacggacccacatacacacaagtacaaag
ttaccgaggaccacaatgccaagagagaagctcatcacattcaggagtaacgtcagcact
gatgtggatgacggagacaatagtgacagcatttactttgttgacattgatgaggatcga
agaaggcagcaaggagaaatggacgaaaagaagagagaaggaaagaataaagctgacaag
ggacagaagctgcagacaaaatcagattatcttcacaacagtgaaatgactgggataaag
agaggaggagaggtagaagagatgcccaagcaaagaaatagcagtaagaacaaggggacc
aggaaacagcaggaggtagtagaagaagaaaaatgggagaagaagaaaattaagcaagaa
aacaatcaagaagatgaacaatcaaaaaagatgaaaaggaaaaatgcaacagacagcatt
tctgaggcgagctcttcatcagatgaagagtttgaggtggactcgttgagtgaggaggag
ctggagaaactcatggaagccatagatgagaggaagaagctcatcgctacactgagaaca
caaccttggccaatgcacaagaaaatgtctatgctcaggaagtggcaagcatttatagag
aaatacgagggcattttaggaaaaggcaaagggaggaatctgtatgcccacaaggtcaag
atgatgaagaaatgggggaaatttcagagacacttcaataactttaagaaggcctgcatt
ccatgggagatgaagatcaaggaaattgaaagtcactttggctcaacagtagcttcctat
tttgtatttctacgatggttgtttggaatcaacataattctctttgtcctgtcctttggg
cttgttatgtttcctgaggcattaatggggaagccatatgggagtattcccaggaagaca
gtctccaggcaagaagaacccactgctatgaactttgatgtcttatatgacattgggggc
tacatgaagtatactgtcatgttttatggctactatgacgaccagagaacaattggctgg
ctcagataccgcatgcccctgtgctacttcctggttggggtgtgcagcttggcttacagt
tacatggtggtcatcagaaccatggcacgcaatgccagtgaagaatgtggaagagatgac
accaactttaaatacagctggcaaatattcaccggttgggattacctcattggaaacccg
gaggcagctgacaacaagtttgcctccatcaccacaaactttaaggaagtccttgttgat
gaggcagagttaaaaaaatatgaaaaccctcgcttgatgctcttctaccgtgtcatgtgc
aacatcctggttctcgtcatacttacaggaagtggatatataatttattatatagtgcgc
aggtctgagttttttttccgggatgggatggacaagcacagctggtgggaaagaaatgag
gtgaacgtagtaatgtctctgttaagcacgttctgtccaatgatgtttgaagcaataacc
cttttggagaattaccatccacgcgtttccctgctcttccagatgggccgtgtctttgcc
ctttacacaggcaacctttacagcttcctcatagctgtcgttgaacagatcaagttggcg
atggttgacgaagaggtaatgaagcataatctgaccatatggcagactaacatgtataac
aggtccatagtggagaattctactggttctcctatcacagtggatcctgcagatgtaccc
agagggccttgctgggagactatggtgggacaggaatttgtacgtatgctggttgtagac
acattgactttttacactgtgttgctgatcaatgacttctcccgagcagtcgtgattcgt
ttcctcaacgactactggtgctgggacctggagtacacctttccgtgctattccctgttc
gatttgagtgggaaccttctcaccatcatattcaaccaaggaatggtctgtatggggaca
ttctacgccccctgtcttcccatactcaacctcatcagactgcaaacgtccatgtattca
caatgctgggctgtcatgagcagcaacatccctcacacgcacatctgcaaagcctcacgt
tctagcaacttctacatggccatactgctcttcatcctctttctctgcacagtgcccctc
gcctacaccgtcgtcactttgcgtccctcctttgactgcggacctttcagtgggaaaaac
cgcgtgtatgatgtgatcctggaggcgttgcagatggattttcctgcctggaccggaaac
gtgatcagctacatctcaaacccgggactggttctgtctttcctactgctcatagccctc
acactttattacctacatacgacatctaaaacatacaagcaggccaacaatgatctgaaa
atgaaactgcggactcaacatgaggagaatagaaggagggcaagccgtttaacaaagaag
acagccgaacatttggatcaagacaaaaacatggctgccgatgaacagcaggacaagcag
agcaacaaccattcgtctttgaaagctaaagacagcagaaagagcagcagccagagttgt
tatcttcctcctcctccaaatattttctttgggagtcgaggttctggcctcaaatactct
cgcaaccctccttacactcgaccccctgcaccccggtctcatctcttgcacggacaactg
ccaggagttccaccttattaa
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