Ictalurus furcatus (blue catfish): 128599067
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Entry
128599067 CDS
T09387
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128599067 (tncb)
04518 Integrin signaling
128599067 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128599067 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ifu00536
]
128599067 (tncb)
Glycosaminoglycan binding proteins [BR:
ifu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128599067 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
Fn3_Dep-1_3rd
EGF_2
EGF_Tenascin
Fn3_Dep-1_2nd
Fn3_PBP1
FN3_DSCAM-DSCAML_C
DUF7949
Pur_ac_phosph_N
EGF
fn3_2
REJ
SPE9_EGF_3rd
hEGF
Motif
Other DBs
NCBI-GeneID:
128599067
NCBI-ProteinID:
XP_053466403
LinkDB
All DBs
Position
22:complement(15517833..15571757)
Genome browser
AA seq
2251 aa
AA seq
DB search
MGMRGLLLAYVSMAILLDLSMAGLLRKMIRHRRESLMPPKSENMTLPNPDQPVVFNHVYN
INVPTGSLCSVDLDSPGGSEMKPKSVPSEQHIEHTVDGENQIVFTHRINIPKQACGCDSH
MPDLKDLLNRLEMLEAEVSSLREQCTSGNGCCGAQVTGEITTKPYCNGHGNYSIETCNCV
CEPGWKGPNCSETECPSSCQDQGRCVDGKCVCFEGFGGEDCGIELCPVDCGEYGQCIDGS
CMCAEGYMGEDCSMTNCLNNCLGRGRCVDGECLCNEPWTGFDCSELICPNDCFDRGRCIN
GTCYCDEGFIGEDCGELTCPDNCNNRGLCVSGQCICNFGYSGEDCSKLTCPNDCSERGHC
YNGRCICDPGFQGEDCSSLSCPDNCNDRGKCVNGECICEPGYQGNDCSELSCPNDCHNHG
RCIDGKCICQQGFAGEDCSIKTCPSDCHDHGECVDGNCVCHVGFIGKDCSELTCLNNCHN
HGHCVNGQCVCSEGFTGEDCSEKTCPNNCLDRGFCDNGQCICYESYTGVDCSEMTCPGNC
NDQGHCLNGMCICDLGFTGEDCSESKSVYDFIFLQIQPYSECLVQQRVIMSSPFTVSPPR
DLVVTEVTPETVDLTWVNEVQVTEYLITYMPTAPGGLELDMRVPGEKRSATIRELEPGVE
YLISVYAVLNNKMSIPVSARVATHLPEPEGLKFKAVRETSVEVQWDPLNVPFDGWNLIFR
NTKEENGEILNSLSPPENTFEQSGLGPGQEYEVKLEVLKNNTRGPPASKNVVTMIDAPSQ
VDVRDVTDSTALITWFQPIAQVDGVSVSYGPITGSSDSHTVELSSIDTQYHLAELYPDTE
YSVSLMARRGEMTSVPVYETFTTDLDAPTNLRSIDQTDESITLEWRNSQANVPSYRIKYG
PLSGGEHGELTFPTGPQDITQAKISGLRPGIEYGMGVTAVKDEKESSPATTNAVTDLDAP
KDLEVSETSESTMVLIWRRPVAKIDVYKLVFVAADGHRAEFEVPDSVSTYMLRNLNPGML
YTITLTAERGRKKSVPVSIQASTDNEKPLVGNITISAVSWDGFNISWELKRGELDGFLIE
LADIDGLSKGQNYTLSGQEYSLAITDLSPSTFYRVTLYSLYRGDLLEPVFGEAFTEAEPE
VEQLFTSNNKPDSFMLQWTAPEGIFEMFIIKISDGSGKQRQMSVSGDKRTEVISGLDEAT
EYEIELFGTIAGRNFKPISVKALTGLGKPKGIHLSDVTDTSAAVHWTVPHYRVDSYRITY
VPLHAGSPITVTVDGGESQTVLPNLIPGVTYQVSVISVKGLEESEPAFDTFTTGLGKPKG
IRFSDITDTSAAVHWTVPHYHIDSYRVTYAPIHDGSPLTVAVGGGESQTVLPNLTPGVTY
RVSVISLKGLEESEPASDTFTTGLSKPKGIHFSDVTDTSATVHWTVPHYHIDSYRVTYTP
IHGGSPLIVTVGGGESQTVLPNLTPGVTYQVSVISVKGLEESEPASDTFTTGLGKPMGIR
FSDVTDTSATAHWTIPHYHVDSYRVNYVPIHGGKPMTVTVGGGESQTVLPNLTPGVTYRV
SVISMKGLEESEPASDTFTTGLGKPTGIRFSDVTDTSATAHWTIPHYHVDSYRVNYVPIH
GGKPMTVTMGGGESQTELPNLTPGVTYRVSVISVKGLEESEPASDTFTTGLGKPTGIRFS
DVTDTSATAHWTIPHYHVDSYRVNYVPIHGGKPMTVTVGGGESQTVLPNLTPGVTYQVSV
ISVKGLEESEPASDTFTTGLGKPIGIRFSDVTDTSATAHWTIPRYRVDSYRVNYVPIHGG
RPMTVTVDGGESQTVLPNLTPGVTYRVSVISVKGLEESEPASDTVTTALDRPHSLVAVNI
TDTTALLHWQPTIATVDGYVITYSTESMPPITERVSGNTVEFEMSSLYPGTEYTVKVYAV
REAAKSAATTTQFTTDVDSPEDLEATNIQTESATLTWKAPRAQITGYILTYESADGKVRE
VVLSPTSTSYTMNQLSASTEYTVHLQAISGPLRSHIISTVFTTIGVLYTHPKDCSQALLN
GDTTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKLDFFRNWRNYTAGFGDM
NDEFWLGLLNLHKITSLGQYELRVDLRDKGEHAYAQYEKFSVSEPRSRYKVHVGGYSGTA
GDSMTYHNGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNIMGRYGDNSHSKGVNWF
HWKGHEHSIEFAEMKIRPSNFRNFEGRRKRS
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcgaggcctgcttctggcctatgtctctatggccattctgttggatctctcc
atggctggcctgctgaggaaaatgatcaggcacagacgagagtcactaatgccacccaaa
tccgagaacatgaccctccctaatccagaccaaccagtggtcttcaaccatgtatacaac
atcaatgtcccaactggatccttgtgctctgttgacctggattcacctggaggatcagaa
atgaagcccaagtctgtcccctccgagcagcacattgagcacactgtggatggtgaaaac
cagatagtctttacgcacagaattaacatacccaagcaggcttgtgggtgtgatagccac
atgccagaccttaaagatctcctaaataggctggagatgctggaggctgaagtgtctagt
ctgagggagcagtgtaccagtgggaatggctgctgtggagctcaagttactggtgagatc
actaccaagccatattgcaatggccatggcaactacagtattgaaacctgtaactgtgtg
tgtgagcctggctggaaagggcccaactgctcagagacagaatgccctagttcctgccaa
gatcaaggccgctgtgtggatgggaagtgcgtctgttttgagggctttgggggagaggac
tgtggaattgagctgtgtcctgtggattgtggtgaatatggccagtgcattgatgggtct
tgcatgtgtgcagaaggttacatgggtgaggactgctccatgaccaattgcctcaacaat
tgcctgggtaggggacgctgtgtggacggtgagtgcttgtgcaatgagccatggactggc
tttgactgctcagagcttatatgtcccaatgactgctttgaccgtggccgttgcatcaac
gggacctgctactgtgatgagggcttcattggggaggattgtggtgagctcacctgccca
gataactgtaacaatagaggcctctgtgttagtggtcagtgtatctgcaatttcggctat
agcggagaagactgctccaagcttacatgtccaaatgactgcagtgagagaggccactgc
tacaatggaagatgtatctgtgatcctggcttccaaggtgaggactgtagcagcctctcc
tgccctgacaattgcaatgacaggggtaaatgtgtaaatggggaatgtatatgtgaacct
ggataccaaggtaatgattgttctgagctttcctgtcccaatgattgtcacaaccatgga
cgctgcattgatggaaagtgcatttgccaacaaggatttgccggagaggactgtagcatc
aagacttgccccagtgactgtcatgaccatggtgaatgtgtagatggcaactgtgtctgc
catgttggcttcataggcaaagactgcagtgagttgacatgtcttaacaattgtcacaac
catggacactgtgtgaatggtcagtgtgtgtgcagcgaaggatttactggtgaggactgc
agtgaaaaaacgtgtcccaacaactgcctagatcgtgggttttgtgacaatggacagtgt
atctgctatgagagttacactggtgtcgactgctcagagatgacctgcccaggaaactgc
aatgaccaaggccactgcttgaatggcatgtgtatctgtgatttgggattcactggggaa
gactgctctgaaagtaagtcagtttatgattttatttttttacaaattcaaccttacagt
gaatgcttagtccagcagcgtgtcattatgtcttctccgttcacagtctctccaccaagg
gacctggttgtgactgaagtcaccccagagacagtggatctgacctgggtcaatgaggta
caggtgacagagtacctaatcacctacatgccaactgctcctggtggtctggagttagat
atgcgagtacctggtgaaaaaaggtctgctactattagggagctggagcctggtgtggaa
tacttaatcagtgtctatgctgttctaaataacaagatgagcattcctgtgagtgccaga
gtggcaacacatcttccggagccagaaggccttaagtttaaagccgtgagagagacatca
gtggaagttcagtgggatcctcttaatgtcccctttgatggttggaacctcatcttcaga
aatacaaaagaggaaaatggggagattttgaattcattgtcaccacccgagaataccttt
gaacaatctggcctgggccctggacaggaatacgaggttaaacttgaggtgttaaagaac
aacactcgcggacctccagcaagcaagaatgtggttacaatgatcgatgctcctagccag
gtggatgttcgggatgtaacagacagtactgctctgatcacctggttccagcccatagct
caggtggacggtgtctctgtgtcctatgggcctatcactggctcctcagacagccacaca
gtggaactgtcatctatcgacacccagtaccacctggctgaactctacccagacacagag
tacagtgtgtctctcatggcccgccgaggggaaatgactagcgtgcctgtctatgagacc
ttcactacagacctagatgcacctacgaacctgcggtcgatagatcagacagatgaaagc
atcacactggagtggagaaacagccaagccaacgttcccagctaccgtatcaaatatgga
ccactatctggaggggaacatggggagcttacctttcctacaggcccacaggacatcact
caagccaagatttcaggtctcaggcctgggatagagtacggcatgggagtgactgcagtc
aaagatgagaaggaaagttctcctgccaccaccaatgctgttaccgaccttgatgctcct
aaggacctggaggtgagtgagacctcagaaagcacaatggtgctgatctggaggcgacct
gtggctaagatcgatgtctacaagctcgtgttcgtggccgctgacggtcacagggccgag
tttgaagttccggacagtgtcagcacctacatgctgaggaacctgaaccctggcatgctg
tacaccatcaccctgactgcagagcgagggaggaaaaagagcgtgccagtcagcatccag
gcatcaacagacaacgaaaagcccctggtgggcaacatcactatctctgctgtatcctgg
gatggcttcaatatatcctgggagctgaagaggggtgagcttgatggttttctgatcgag
ttggctgacatcgatggtctctccaagggccagaactacactctgtcaggacaggagtac
agcttggctatcactgatctctctcctagcactttttacagggtcactctgtacagcctg
tataggggagatctcttagagccagtgtttggggaggctttcacagaggcagaacctgag
gtggagcagcttttcacctccaacaacaagccagacagttttatgctgcagtggacggct
ccagaaggaatctttgaaatgtttattatcaaaatctctgatggatcgggcaagcaaaga
cagatgagtgtatcgggagacaagagaacagaagtgatctctggcctcgatgaggctaca
gagtatgaaattgagctctttgggacaattgcaggacggaacttcaagcccatttcagtg
aaagctctaacaggtctgggcaaaccaaagggtattcacttgtctgatgtgaccgatacc
tctgctgccgttcactggactgtaccccattaccgagtcgacagctaccgaattacctat
gtgccccttcatgcaggcagtcccataacagtcacagtggacggaggtgagtcccagact
gttctgcccaacctgatacccggggtaacctaccaagtgagcgtcatatcagtgaagggt
ctagaggagagtgagccagcctttgatacatttacaacaggcctgggcaaaccaaaaggt
attcgcttctctgatatcaccgatacctctgccgccgtccactggactgtcccccattac
cacattgacagttaccgagtcacctacgcacccattcatgatggcagtcccctaacagtc
gcagtgggtggaggtgagtcccagactgtgctgcccaacttgacacctggagtgacatac
agagtgagtgtcatatcattgaagggtctggaggagagtgagccagcctctgataccttt
acaacaggtctgagcaaaccaaagggtattcacttctctgatgtcactgatacctctgcc
accgtccactggactgtcccccattaccacattgacagctacagagtcacctacacgccc
attcatggaggcagtcccctaatagtcacagtgggcggaggtgagtcccagactgtgctg
cccaacctgacacccggggtgacctaccaagtgagtgtcatatcagtgaagggtctggag
gagagtgagccagcctctgatacatttacaacaggtctgggcaaaccaatgggtattcgc
ttctctgatgttactgatacctctgccaccgcccattggactatccctcattaccacgtc
gatagttacagagtcaactatgtgcctattcatggaggaaaacctatgacagtcacagtg
ggcggaggtgagtcccagactgtgctgccaaacctgacacccggggtaacctaccgagtg
agtgtcatatcaatgaagggtctggaggagagtgagccagcctctgatacatttacaaca
ggtttgggcaaaccaactggtattcgcttctctgatgttactgatacctctgctaccgcc
cactggactatccctcattatcacgtcgatagttacagagtcaactatgtgcctattcat
ggaggaaaacctatgacagtcacaatgggcggaggtgagtcccagactgagctgcccaac
ctgacacccggggtaacctaccgagtgagtgtcatatcagtgaagggtctggaggagagt
gagccagcctctgatacatttacaacaggtttgggcaaaccaactggtattcgcttctct
gatgtcactgatacctctgccaccgcccattggactatccctcattaccacgtcgatagt
tacagagtcaactatgtgcctattcatggaggaaaacctatgacagtcacagtgggcgga
ggtgagtcccagactgtgctgcccaacttgacacccggggtgacctaccaagtgagtgtc
atatcagtgaaggggctggaggagagtgagccagcatctgatacatttacaacaggtctg
ggcaaaccaattggtattcgcttctctgatgtcactgatacctctgccaccgcccactgg
actatccctcgttaccgtgtcgatagttacagagtcaactatgtgcctattcatggagga
agacctatgacagtcacagtggatggaggtgagtcccagactgtgctgccaaacctgaca
cccggggtgacctaccgagtaagtgtcatatcagtgaagggtctggaggagagtgagcca
gcctctgatacagttacaacagctttggacagacctcatagtttggtggcggtcaacatc
actgataccacggcgctgttgcactggcagcctaccattgccacggtggatggatatgtg
atcacctacagcacagaatcaatgcccccaataacagagcgagtttctggaaacactgtg
gagtttgagatgagctcgctctaccctggcactgagtacactgttaaagtctatgcagtg
agggaagcagccaagagtgctgccacaaccacacagtttactactgatgttgattcccct
gaggacctggaagccactaacatccagacagagagtgccacactgacatggaaagcacca
cgagcacaaatcactggctacatcctcacctacgagtctgctgatggtaaagtccgggag
gtcgtcctcagccccacatccacttcatacaccatgaatcagctaagcgcctccactgaa
tacacagtgcacctgcaggccatctcgggccccctgaggagccacatcatctccactgtt
ttcaccaccatcggtgttctctacacacacccaaaagactgctcccaggctctgctgaat
ggagacaccacctcaggcctttacacaatttatctgcgtggtgatgagagccagcccttg
caggtctactgtgacatgactacagacggaggcggctggattgtgtttgtcaggaggcag
agtggtaaactggacttcttccgtaactggaggaactacactgcaggttttggggacatg
aacgatgaattctggcttggtctcttgaacctgcataaaattacctctctcggtcaatac
gagctgcgagtggatctccgagataagggcgagcatgcatatgctcagtacgaaaagttc
tctgtgtctgagccacgcagtcgctataaggtccacgtgggaggctacagtggcacggca
ggtgattcaatgacataccacaatggccgtcctttctcgacttacgacaacgataacgac
atagctgtcaccaactgtgccctctcatacaagggagctttctggtataagaactgccac
cgggtcaacatcatgggacgatatggggacaacagtcacagcaaaggtgtgaactggttc
cactggaagggtcacgagcactccattgagtttgccgagatgaagatcagaccgtccaac
ttcagaaactttgagggaagaagaaagcgatcgtaa
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integrated database retrieval system
