Ictalurus furcatus (blue catfish): 128599122
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Entry
128599122 CDS
T09387
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128599122 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128599122 (usp39)
Spliceosome [BR:
ifu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
128599122 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
128599122
NCBI-ProteinID:
XP_053466507
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Position
22:complement(5940332..5949160)
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AA seq
497 aa
AA seq
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MANLKRERDIDNDEEEEVRVKVSRSHDAEDKRSRHCPYLDTINRSVLDFDFEKLCSISLS
HINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTKQHIANLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALCNVPPL
RNYFLEEENYRGIRRPPGDIMFLLVHRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
TFQITKQGDAVDFLSWFLNALHGALGGTKKKPSILTKVFQGSMRIFSKKLPHPDLPAEEK
EALLQKDEYQEEMLESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEY
KTYKENFLKKFQLTRLPPYLIFYIKRFTKNNFFIEKNPTIVNFPITNVDLREYLTEEAQV
TEKNTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQ
IWKRREMDDDGNSHTGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttgaaacgggaaagggatatcgataatgacgaagaagaagaggtgcgagtg
aaagtgtcccgttctcacgacgctgaagataaaagaagccggcactgtccctacctcgac
acgatcaacaggagtgttttggactttgactttgagaagctgtgctcaatctctctctcg
cacattaacgtctacgcctgtctcatctgtggaaaatatttccaagggagaggtctgaag
tcccatgcctacacccacagcgttcagttcacacatcatgtcttcttaaatcttcacacc
ctcaaattctactgcctaccggataactacgagatcatcgattcatctcttgaggacatc
acctacgtgctgaagccaacgttcaccaaacagcacatcgctaatttggataagcagggg
aagctgtacagggcctacgatggaacgacgtacctgcctggtattgtgggcctcaataat
atcaaggccaacgactacgccaatgtagttctacaggctctttgcaacgtgcctcctctc
cgcaattacttcctagaggaggagaactaccgtgggatccggcggcctcccggcgacatc
atgttcctgctggtgcaccgcttcggcgagctcatgcgcaagctctggaacccgcgcaac
tttaaggcccacgtgtcgccacacgaaatgctgcaggctgtggtgctttgcagtaagaag
accttccagatcaccaagcaaggggatgctgtggactttctttcttggttcctaaatgcc
ctgcatggagctctgggtggaaccaagaagaaaccatctattctcacaaaagtcttccag
gggtccatgcgtatcttctcgaagaaacttcctcaccctgatttgcctgcagaggagaaa
gaggcgctgctgcagaaggacgagtatcaggaggagatgctggagtccacgtttctgtac
ctcacccttgacctacctactgcaccgctctacaaagatgagaaagagcagctgatcatc
cctcaggttcctctcttcaacattctggcaaaattcaacggcaacactgaaaaggagtac
aaaacctacaaagaaaacttcctcaaaaagttccagttaacccgacttcctccgtacctt
atcttctacatcaagcgattcaccaagaataactttttcatcgaaaaaaatcccaccatc
gtcaatttccccatcactaatgttgacctgcgtgagtacctaacagaagaggcccaggtt
actgagaagaacacaacctatgacttggtagccaatgtagtgcatgatgggaagccaaca
gagggatcatacagaattcatgtcctacatcatggcacagggaagtggtacgagctccaa
gacctgcaggtaacagatatcctgcctcagatgatcacactgtcagaagcgtacatacag
atctggaagaggcgtgaaatggacgatgatggaaacagccacacaggagcatga
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