Ictalurus furcatus (blue catfish): 128599185
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Entry
128599185 CDS
T09387
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128599185 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ifu01007
]
128599185 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128599185 (farsa)
Enzymes [BR:
ifu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
128599185 (farsa)
Amino acid related enzymes [BR:
ifu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
128599185 (farsa)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128599185 (farsa)
Prokaryotic type
128599185 (farsa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
HTH_11
ARM_FBXO47
MarR_2
Motif
Other DBs
NCBI-GeneID:
128599185
NCBI-ProteinID:
XP_053466629
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All DBs
Position
2:complement(25313177..25330545)
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AA seq
497 aa
AA seq
DB search
MADTGVLESLLRLVEKVDGGIDSQDVAGSLSVDHQVVVGAVKSLQALGEVIDAEQRSSKH
WELTGEGCEIAEQGSHEARVFNAIPEEGLPQSQLMKLASGKVGFSKAMSNKWIRVDKGHK
GGPRVFRMVESIDDTVREKLQLVKKGQSSQLEEKEKNELKKRKLLTEVTVKSYWITKGSN
FSTTITKQETELTPEMIASGSWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPAVAHKFPQDYLERVKKVH
SEGGYGSQGYKYDWKIEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGVLHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPVCRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggtgtgttagaatcgctcttgcggctagtggaaaaggttgacggtggt
attgacagccaggatgtggcgggcagtctctcagtcgaccaccaggtcgttgttggggcc
gtaaagagtctccaggctctcggagaggtgattgatgcagagcagcgctcctccaagcac
tgggagctgactggagagggatgcgagatagccgagcagggaagccatgaagcccgggtg
tttaacgccatacccgaagagggattgcctcagagccagctgatgaaactggccagtggg
aaagtgggcttcagcaaggccatgtccaacaaatggatccgtgtggataaaggtcacaag
ggcggccccagagtgttcagaatggtggagagcattgacgacacggtcagagagaaactg
cagctagtgaagaagggccagtcatcgcaactggaggagaaagagaagaacgaactgaag
aaacggaaactgctcacagaggtgacagttaaatcctactggatcaccaaaggcagcaac
ttcagcaccaccatcaccaaacaggagactgaactcacaccagaaatgattgctagtgga
agttggaaggagaagaaattcaagccctataactttgaggcaatgggtgttgctccagac
tgtggccatttgcaccctctgatgaaggtgcggacgcagttcagacagatcttcctggag
atggggttcacggagatgcccaccaataactttattgagagctctttctggaactttgac
tctctgttccagccccagcagcacccagccagagatcagcatgacaccttcttcctgtct
gatccagcagtagctcataaatttccccaagactacctagagagggtgaaaaaggtccat
tctgagggaggatatggatcacaggggtacaagtatgactggaagattgaggaagctcag
aagaacatcctccgtacacacacgacagctgtcagcgcacgcatgctctacaaactggca
cagcaggagaagttcacaccagtgaagtacttctctatagaccgcgtctttcgcaacgag
actctagacgccactcacctggcagagttccatcagatcgagggtgtggtggctgattat
ggcctgacactgggcgacttgatgggggttctgcatcaattcttcaccaaactaggaatc
actaaattgcgtttcaagccagcttacaacccttacactgagcccagcatggaggtgttc
agctatcatgaagggctgaagaaatgggtagaggttgggaactctggggtcttcagacct
gagatgctgctgcctatgggtttaccagaggacgtgtctgtcatcgcctggggactgtct
ttggagcggcccaccatgatcaagtatggcatcaacaacatccgtgagcttgtggggcac
aaagtaaacctgcagatggtgtacgacagcccagtgtgtcgcctggactcttaa
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